RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 SFTA2Q6UW10 78 aa4.95□□□□□ -1.62
SUPT16H-204ENST00000555943 C2orf82Q6UX34 121 aa4.95□□□□□ -1.62
SUPT16H-204ENST00000555943 SMIM29Q86T20 159 aa4.95□□□□□ -1.62
SUPT16H-204ENST00000555943 CARD19Q96LW7 228 aa4.95□□□□□ -1.62
SUPT16H-204ENST00000555943 MYMXA0A1B0GTQ4 84 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 S100A12P80511 92 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 PYY3Q5JQD4 70 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 Q6ZRU5 148 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 NDUFA12Q9UI09 145 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
SUPT16H-204ENST00000555943 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 KRTAP29-1A8MX34 341 aaPredicted RBP4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 HERV-K104P63124 156 aa4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 MAJINQ3KP22 176 aa4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
SUPT16H-204ENST00000555943 ZNF815PA8K554 130 aa4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 LINC00587B1AMM8 73 aa4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 SPATA45Q537H7 98 aa4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 HSPG2P98160 4391 aa4.92□□□□□ -1.62
SUPT16H-204ENST00000555943 IGKV2D-26A0A0A0MRZ7 120 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 LOC107984640A0A0U1RRK4 108 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 PFN2P35080 140 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 FUSP35637 526 aaKnown RBP eCLIP4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 LINC00158P58513 81 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 TSPEAR-AS2P59090 65 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 CIRBPQ14011 172 aaKnown RBP4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 SCGB1D4Q6XE38 83 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 C9orf163Q8N9P6 203 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 C6orf48Q9UBA6 75 aa4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
SUPT16H-204ENST00000555943 C9orf116Q5BN46 136 aaPredicted RBP4.9□□□□□ -1.63
SUPT16H-204ENST00000555943 ERG28Q9UKR5 140 aa4.9□□□□□ -1.63
SUPT16H-204ENST00000555943 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 COX17Q14061 63 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 PCP2Q8IVA1 136 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
SUPT16H-204ENST00000555943 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 NDUFC2-KCTD14E9PQ53 114 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 TLX1NBP0CAT3 122 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 COX8AP10176 69 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
SUPT16H-204ENST00000555943 IGKV2-24A0A0C4DH68 120 aa4.87□□□□□ -1.63
SUPT16H-204ENST00000555943 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
SUPT16H-204ENST00000555943 SLC25A34Q6PIV7 304 aa4.87□□□□□ -1.63
SUPT16H-204ENST00000555943 SDIM1Q6ZPB5 146 aa4.87□□□□□ -1.63
SUPT16H-204ENST00000555943 A0A096LNI7 61 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 DLEU1O43261 78 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 TIMM17BO60830 172 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 Q6ZRP5 223 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 BOD1L2Q8IYS8 172 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 C12orf57Q99622 126 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
SUPT16H-204ENST00000555943 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
SUPT16H-204ENST00000555943 COPS9Q8WXC6 57 aa4.85□□□□□ -1.63
SUPT16H-204ENST00000555943 XAGE1AQ9HD64 81 aa4.85□□□□□ -1.63
SUPT16H-204ENST00000555943 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
SUPT16H-204ENST00000555943 HERC1Q15751 4861 aa4.85□□□□□ -1.63
SUPT16H-204ENST00000555943 DNAH5Q8TE73 4624 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 EPM2AB3EWF7 344 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 CHTF8P0CG12 524 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 NPC2P61916 151 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 Q6ZVH6 145 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 DAND5Q8N907 189 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 PRO1933Q9H354 126 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 UQCR10Q9UDW1 63 aa4.84□□□□□ -1.63
SUPT16H-204ENST00000555943 TSTD3H0UI37 97 aa4.83□□□□□ -1.64
SUPT16H-204ENST00000555943 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
SUPT16H-204ENST00000555943 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
SUPT16H-204ENST00000555943 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
SUPT16H-204ENST00000555943 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 IFITM1P13164 125 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 HNRNPA3P51991 378 aaKnown RBP4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 SPACA4Q8TDM5 124 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 LITAFQ99732 161 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 SPANXDQ9BXN6 97 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 SPANXB1Q9NS25 103 aaPredicted RBP4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 SPANXCQ9NY87 97 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 TP73-AS1Q9UF72 201 aa4.82□□□□□ -1.64
SUPT16H-204ENST00000555943 A0A087WYN8 130 aa4.81□□□□□ -1.64
SUPT16H-204ENST00000555943 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms