RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.87
IFT43-209ENST00000555305 APLNQ9ULZ1 77 aa9.65□□□□□ -0.87
IFT43-209ENST00000555305 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
IFT43-209ENST00000555305 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
IFT43-209ENST00000555305 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
IFT43-209ENST00000555305 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
IFT43-209ENST00000555305 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
IFT43-209ENST00000555305 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
IFT43-209ENST00000555305 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
IFT43-209ENST00000555305 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
IFT43-209ENST00000555305 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
IFT43-209ENST00000555305 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
IFT43-209ENST00000555305 Q6ZRU5 148 aa9.61□□□□□ -0.87
IFT43-209ENST00000555305 SNCGO76070 127 aa9.6□□□□□ -0.87
IFT43-209ENST00000555305 A0A1B0GX51 115 aa9.6□□□□□ -0.87
IFT43-209ENST00000555305 HUWE1Q7Z6Z7 4374 aaKnown RBP9.59□□□□□ -0.87
IFT43-209ENST00000555305 DNAL4O96015 105 aa9.59□□□□□ -0.87
IFT43-209ENST00000555305 TTC32Q5I0X7 151 aa9.59□□□□□ -0.87
IFT43-209ENST00000555305 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
IFT43-209ENST00000555305 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
IFT43-209ENST00000555305 NCR3O14931 201 aa9.56□□□□□ -0.88
IFT43-209ENST00000555305 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
IFT43-209ENST00000555305 PRR3P79522 188 aaKnown RBP9.55□□□□□ -0.88
IFT43-209ENST00000555305 C14orf177Q52M58 125 aa9.54□□□□□ -0.88
IFT43-209ENST00000555305 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
IFT43-209ENST00000555305 M0R378 163 aa9.53□□□□□ -0.88
IFT43-209ENST00000555305 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
IFT43-209ENST00000555305 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
IFT43-209ENST00000555305 PSCAO43653 123 aa9.52□□□□□ -0.88
IFT43-209ENST00000555305 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
IFT43-209ENST00000555305 VPREB1P12018 145 aa9.52□□□□□ -0.89
IFT43-209ENST00000555305 Q6ZRP5 223 aa9.52□□□□□ -0.89
IFT43-209ENST00000555305 SVIPQ8NHG7 77 aa9.52□□□□□ -0.89
IFT43-209ENST00000555305 SIGMAR1Q99720 223 aa9.52□□□□□ -0.89
IFT43-209ENST00000555305 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
IFT43-209ENST00000555305 Q8NDZ9 215 aa9.51□□□□□ -0.89
IFT43-209ENST00000555305 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
IFT43-209ENST00000555305 PLA2G2DQ9UNK4 145 aa9.51□□□□□ -0.89
IFT43-209ENST00000555305 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 A0A087WYN8 130 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 A0A1B0GV72 72 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 LECT2O14960 151 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
IFT43-209ENST00000555305 H3BQ85 93 aa9.49□□□□□ -0.89
IFT43-209ENST00000555305 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
IFT43-209ENST00000555305 NBDYA0A0U1RRE5 68 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 GHRHP01286 108 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 ORMDL1Q9P0S3 153 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
IFT43-209ENST00000555305 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 CNBPP62633 177 aaKnown RBP9.47□□□□□ -0.89
IFT43-209ENST00000555305 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 Q8N814 137 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 NKAPP1Q8N9T2 125 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 KRTAP1-5Q9BYS1 174 aa9.47□□□□□ -0.89
IFT43-209ENST00000555305 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
IFT43-209ENST00000555305 ZNF73O43830 326 aaPredicted RBP9.46□□□□□ -0.9
IFT43-209ENST00000555305 SLPIP03973 132 aa9.46□□□□□ -0.9
IFT43-209ENST00000555305 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
IFT43-209ENST00000555305 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
IFT43-209ENST00000555305 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
IFT43-209ENST00000555305 TMEM256-PLSCR3K7ERE1 68 aa9.45□□□□□ -0.9
IFT43-209ENST00000555305 FAM240AA0A1B0GVK7 77 aa9.44□□□□□ -0.9
IFT43-209ENST00000555305 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
IFT43-209ENST00000555305 ACYP1P07311 99 aa9.42□□□□□ -0.9
IFT43-209ENST00000555305 COX7BP24311 80 aa9.42□□□□□ -0.9
IFT43-209ENST00000555305 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
IFT43-209ENST00000555305 ELOF1P60002 83 aaKnown RBP9.41□□□□□ -0.9
IFT43-209ENST00000555305 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
IFT43-209ENST00000555305 GAGE2BQ13066 116 aa9.4□□□□□ -0.9
IFT43-209ENST00000555305 JMJD7-PLA2G4BH0Y9G9 81 aa9.4□□□□□ -0.91
IFT43-209ENST00000555305 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
IFT43-209ENST00000555305 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.38□□□□□ -0.91
IFT43-209ENST00000555305 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
IFT43-209ENST00000555305 PRYO14603 147 aa9.37□□□□□ -0.91
IFT43-209ENST00000555305 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
IFT43-209ENST00000555305 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
IFT43-209ENST00000555305 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
IFT43-209ENST00000555305 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
IFT43-209ENST00000555305 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
IFT43-209ENST00000555305 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
IFT43-209ENST00000555305 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
IFT43-209ENST00000555305 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
IFT43-209ENST00000555305 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
IFT43-209ENST00000555305 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
IFT43-209ENST00000555305 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
IFT43-209ENST00000555305 Q6ZQY7 126 aa9.32□□□□□ -0.92
IFT43-209ENST00000555305 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
IFT43-209ENST00000555305 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
IFT43-209ENST00000555305 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
IFT43-209ENST00000555305 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
IFT43-209ENST00000555305 MEGF8Q7Z7M0 2845 aa9.31□□□□□ -0.92
IFT43-209ENST00000555305 Q6ZR54 194 aa9.31□□□□□ -0.92
IFT43-209ENST00000555305 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms