RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LEPROTO15243 131 aa6.67□□□□□ -1.34
TMEM260-206ENST00000555046 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
TMEM260-206ENST00000555046 NMUP48645 174 aa6.66□□□□□ -1.34
TMEM260-206ENST00000555046 KRTDAPP60985 99 aa6.66□□□□□ -1.34
TMEM260-206ENST00000555046 LBHQ53QV2 105 aaPredicted RBP6.66□□□□□ -1.34
TMEM260-206ENST00000555046 LINC01545Q5VT33 79 aa6.66□□□□□ -1.34
TMEM260-206ENST00000555046 ERG28Q9UKR5 140 aa6.66□□□□□ -1.34
TMEM260-206ENST00000555046 LRP1Q07954 4544 aaKnown RBP6.65□□□□□ -1.34
TMEM260-206ENST00000555046 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
TMEM260-206ENST00000555046 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.34
TMEM260-206ENST00000555046 PFN2P35080 140 aa6.65□□□□□ -1.34
TMEM260-206ENST00000555046 LINC00158P58513 81 aa6.65□□□□□ -1.34
TMEM260-206ENST00000555046 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.34
TMEM260-206ENST00000555046 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
TMEM260-206ENST00000555046 J3QQQ9 107 aa6.64□□□□□ -1.35
TMEM260-206ENST00000555046 C3orf79P0CE67 100 aa6.64□□□□□ -1.35
TMEM260-206ENST00000555046 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
TMEM260-206ENST00000555046 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
TMEM260-206ENST00000555046 E9PLD3 99 aa6.63□□□□□ -1.35
TMEM260-206ENST00000555046 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
TMEM260-206ENST00000555046 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
TMEM260-206ENST00000555046 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
TMEM260-206ENST00000555046 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
TMEM260-206ENST00000555046 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
TMEM260-206ENST00000555046 SNRPEP62304 92 aaKnown RBP6.62□□□□□ -1.35
TMEM260-206ENST00000555046 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
TMEM260-206ENST00000555046 HIST3H2BBQ8N257 126 aa6.62□□□□□ -1.35
TMEM260-206ENST00000555046 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
TMEM260-206ENST00000555046 M0QXV9 152 aa6.61□□□□□ -1.35
TMEM260-206ENST00000555046 UBE2BP63146 152 aa6.61□□□□□ -1.35
TMEM260-206ENST00000555046 NKAPP1Q8N9T2 125 aa6.61□□□□□ -1.35
TMEM260-206ENST00000555046 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
TMEM260-206ENST00000555046 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
TMEM260-206ENST00000555046 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
TMEM260-206ENST00000555046 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
TMEM260-206ENST00000555046 SND1-IT1Q9HBX3 110 aa6.6□□□□□ -1.35
TMEM260-206ENST00000555046 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
TMEM260-206ENST00000555046 FAT3Q8TDW7 4589 aa6.59□□□□□ -1.36
TMEM260-206ENST00000555046 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
TMEM260-206ENST00000555046 C5orf52A6NGY3 159 aa6.58□□□□□ -1.36
TMEM260-206ENST00000555046 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
TMEM260-206ENST00000555046 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
TMEM260-206ENST00000555046 SMIM13P0DJ93 91 aa6.58□□□□□ -1.36
TMEM260-206ENST00000555046 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
TMEM260-206ENST00000555046 A0A0U1RRA0 63 aa6.57□□□□□ -1.36
TMEM260-206ENST00000555046 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
TMEM260-206ENST00000555046 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
TMEM260-206ENST00000555046 MIEN1Q9BRT3 115 aa6.57□□□□□ -1.36
TMEM260-206ENST00000555046 PSORS1C2Q9UIG4 136 aa6.57□□□□□ -1.36
TMEM260-206ENST00000555046 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
TMEM260-206ENST00000555046 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
TMEM260-206ENST00000555046 MIR7-3HGQ8N6C7 128 aa6.56□□□□□ -1.36
TMEM260-206ENST00000555046 IGKV2D-26A0A0A0MRZ7 120 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 TIMM17BO60830 172 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 OXTP01178 125 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 S100A12P80511 92 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
TMEM260-206ENST00000555046 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 M0R378 163 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 SCGB1D1O95968 90 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 VPREB1P12018 145 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
TMEM260-206ENST00000555046 IGLV7-43P04211 117 aa6.53□□□□□ -1.36
TMEM260-206ENST00000555046 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
TMEM260-206ENST00000555046 REG3GQ6UW15 175 aa6.53□□□□□ -1.36
TMEM260-206ENST00000555046 SCGB1D4Q6XE38 83 aa6.53□□□□□ -1.36
TMEM260-206ENST00000555046 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
TMEM260-206ENST00000555046 GAGE10A6NGK3 116 aa6.52□□□□□ -1.37
TMEM260-206ENST00000555046 RPL37AP8A6NKH3 93 aa6.52□□□□□ -1.37
TMEM260-206ENST00000555046 ATOH7Q8N100 152 aa6.52□□□□□ -1.37
TMEM260-206ENST00000555046 CBY1Q9Y3M2 126 aa6.52□□□□□ -1.37
TMEM260-206ENST00000555046 IGLV1-50A0A075B6I6 118 aa6.51□□□□□ -1.37
TMEM260-206ENST00000555046 BCE1O60756 84 aa6.51□□□□□ -1.37
TMEM260-206ENST00000555046 NDUFC2O95298 119 aa6.51□□□□□ -1.37
TMEM260-206ENST00000555046 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
TMEM260-206ENST00000555046 Q6ZVH6 145 aa6.51□□□□□ -1.37
TMEM260-206ENST00000555046 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
TMEM260-206ENST00000555046 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
TMEM260-206ENST00000555046 ZNF861PO60384 105 aa6.5□□□□□ -1.37
TMEM260-206ENST00000555046 TNXBP22105 4242 aa6.49□□□□□ -1.37
TMEM260-206ENST00000555046 ANKRD39Q53RE8 183 aa6.49□□□□□ -1.37
TMEM260-206ENST00000555046 DAND5Q8N907 189 aa6.49□□□□□ -1.37
TMEM260-206ENST00000555046 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
TMEM260-206ENST00000555046 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 IFITM1P13164 125 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 UBE2AP49459 152 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
TMEM260-206ENST00000555046 S100A7L2Q5SY68 101 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
TMEM260-206ENST00000555046 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
TMEM260-206ENST00000555046 PPDPFQ9H3Y8 114 aa6.47□□□□□ -1.37
TMEM260-206ENST00000555046 SPANXCQ9NY87 97 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms