RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 IGKV2D-28P01615 120 aa11.74□□□□□ -0.53
SHOX-204ENST00000554971 COX17Q14061 63 aa11.74□□□□□ -0.53
SHOX-204ENST00000554971 LCE6AA0A183 80 aa11.74□□□□□ -0.53
SHOX-204ENST00000554971 XCL1P47992 114 aa11.74□□□□□ -0.53
SHOX-204ENST00000554971 LINC00337Q8N6G1 96 aa11.74□□□□□ -0.53
SHOX-204ENST00000554971 LY6G6CO95867 125 aa11.73□□□□□ -0.53
SHOX-204ENST00000554971 SNCGO76070 127 aa11.72□□□□□ -0.53
SHOX-204ENST00000554971 Q6Q795 121 aa11.72□□□□□ -0.53
SHOX-204ENST00000554971 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
SHOX-204ENST00000554971 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.53
SHOX-204ENST00000554971 BAALC-AS2P0C853 105 aa11.7□□□□□ -0.54
SHOX-204ENST00000554971 CKS1BP61024 79 aa11.7□□□□□ -0.54
SHOX-204ENST00000554971 PFN2P35080 140 aa11.7□□□□□ -0.54
SHOX-204ENST00000554971 LELP1Q5T871 98 aa11.7□□□□□ -0.54
SHOX-204ENST00000554971 LINC00269Q8N2A0 174 aa11.7□□□□□ -0.54
SHOX-204ENST00000554971 REG3AQ06141 175 aa11.69□□□□□ -0.54
SHOX-204ENST00000554971 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
SHOX-204ENST00000554971 NDUFC2O95298 119 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 CFAP161Q6P656 301 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 SMIM11BQ8TCY0 68 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 DNAH17Q9UFH2 4485 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 KIAA0087Q14695 138 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 UBE2DNLQ8IWF7 75 aa11.68□□□□□ -0.54
SHOX-204ENST00000554971 ANGP03950 147 aaKnown RBP11.67□□□□□ -0.54
SHOX-204ENST00000554971 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
SHOX-204ENST00000554971 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
SHOX-204ENST00000554971 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
SHOX-204ENST00000554971 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
SHOX-204ENST00000554971 FAM218AQ96MZ4 157 aa11.66□□□□□ -0.54
SHOX-204ENST00000554971 DNAL4O96015 105 aa11.66□□□□□ -0.54
SHOX-204ENST00000554971 MALP21145 153 aa11.66□□□□□ -0.54
SHOX-204ENST00000554971 A0A1B0GX51 115 aa11.64□□□□□ -0.55
SHOX-204ENST00000554971 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
SHOX-204ENST00000554971 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
SHOX-204ENST00000554971 PRR34Q9NV39 138 aa11.63□□□□□ -0.55
SHOX-204ENST00000554971 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
SHOX-204ENST00000554971 KRTAP1-5Q9BYS1 174 aa11.61□□□□□ -0.55
SHOX-204ENST00000554971 Q8N3U1 123 aa11.6□□□□□ -0.55
SHOX-204ENST00000554971 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
SHOX-204ENST00000554971 C22orf24Q9Y442 160 aa11.6□□□□□ -0.55
SHOX-204ENST00000554971 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
SHOX-204ENST00000554971 PKD1P98161 4303 aa11.58□□□□□ -0.55
SHOX-204ENST00000554971 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.55
SHOX-204ENST00000554971 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
SHOX-204ENST00000554971 HECTD4Q9Y4D8 3996 aa11.58□□□□□ -0.56
SHOX-204ENST00000554971 M0R2N4 97 aa11.58□□□□□ -0.56
SHOX-204ENST00000554971 Q6ZR54 194 aa11.58□□□□□ -0.56
SHOX-204ENST00000554971 A0A087WYN8 130 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 TRBV7-7A0A0K0K1E9 115 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 OBSCN-AS1Q96MR7 158 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 Q9HAA7 133 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
SHOX-204ENST00000554971 NBDYA0A0U1RRE5 68 aa11.56□□□□□ -0.56
SHOX-204ENST00000554971 LINC00643Q86TS7 51 aa11.56□□□□□ -0.56
SHOX-204ENST00000554971 IGLV10-54A0A075B6I4 117 aa11.56□□□□□ -0.56
SHOX-204ENST00000554971 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
SHOX-204ENST00000554971 LINC00167Q96N53 147 aa11.56□□□□□ -0.56
SHOX-204ENST00000554971 ANAPC13Q9BS18 74 aa11.56□□□□□ -0.56
SHOX-204ENST00000554971 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
SHOX-204ENST00000554971 LECT2O14960 151 aa11.54□□□□□ -0.56
SHOX-204ENST00000554971 NDUFV3P56181 108 aaKnown RBP11.54□□□□□ -0.56
SHOX-204ENST00000554971 LINC01556Q5JQF7 62 aa11.54□□□□□ -0.56
SHOX-204ENST00000554971 ORMDL1Q9P0S3 153 aa11.54□□□□□ -0.56
SHOX-204ENST00000554971 KLK12Q9UKR0 248 aa11.52□□□□□ -0.56
SHOX-204ENST00000554971 ENHOQ6UWT2 76 aa11.52□□□□□ -0.57
SHOX-204ENST00000554971 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
SHOX-204ENST00000554971 Q8N814 137 aa11.49□□□□□ -0.57
SHOX-204ENST00000554971 JMJD7-PLA2G4BH0Y9G9 81 aa11.48□□□□□ -0.57
SHOX-204ENST00000554971 TMEM256-PLSCR3K7ERE1 68 aa11.48□□□□□ -0.57
SHOX-204ENST00000554971 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
SHOX-204ENST00000554971 S100A7L2Q5SY68 101 aa11.47□□□□□ -0.57
SHOX-204ENST00000554971 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
SHOX-204ENST00000554971 H3BQ85 93 aa11.47□□□□□ -0.57
SHOX-204ENST00000554971 C9orf116Q5BN46 136 aaPredicted RBP11.47□□□□□ -0.57
SHOX-204ENST00000554971 GAGE2AQ6NT46 116 aa11.47□□□□□ -0.57
SHOX-204ENST00000554971 F8WDY8 70 aa11.46□□□□□ -0.58
SHOX-204ENST00000554971 RTL8CO15255 209 aa11.45□□□□□ -0.58
SHOX-204ENST00000554971 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
SHOX-204ENST00000554971 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
SHOX-204ENST00000554971 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
SHOX-204ENST00000554971 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
SHOX-204ENST00000554971 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
SHOX-204ENST00000554971 SMCR5Q8TEV8 140 aa11.43□□□□□ -0.58
SHOX-204ENST00000554971 C1orf134Q5TEV5 83 aa11.43□□□□□ -0.58
SHOX-204ENST00000554971 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
SHOX-204ENST00000554971 LINC00575Q6W349 94 aa11.42□□□□□ -0.58
SHOX-204ENST00000554971 C14orf132Q9NPU4 83 aa11.42□□□□□ -0.58
SHOX-204ENST00000554971 NCR3O14931 201 aa11.41□□□□□ -0.58
SHOX-204ENST00000554971 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
SHOX-204ENST00000554971 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
SHOX-204ENST00000554971 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
SHOX-204ENST00000554971 SLPIP03973 132 aa11.4□□□□□ -0.58
SHOX-204ENST00000554971 CCKP06307 115 aa11.39□□□□□ -0.59
SHOX-204ENST00000554971 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
SHOX-204ENST00000554971 Q8NDZ9 215 aa11.39□□□□□ -0.59
SHOX-204ENST00000554971 GHRHP01286 108 aa11.39□□□□□ -0.59
SHOX-204ENST00000554971 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms