RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 IGHV1-24A0A0C4DH33 117 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 G0S2P27469 103 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 CRIP1P50238 77 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 C20orf203Q8NBC4 194 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 PGLYRP4Q96LB8 373 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 KIR2DL4Q99706 377 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
ATXN3-228ENST00000554592 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 TMSB15BA0A087X1C1 80 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 LINC01546A6NGU7 62 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 IGLC6P0CF74 106 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 ZNF56Q15929 161 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 FA2HQ7L5A8 372 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 SMIM15Q7Z3B0 74 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 DIRC1Q969H9 104 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 CNFNQ9BYD5 112 aa2.91□□□□□ -1.94
ATXN3-228ENST00000554592 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-228ENST00000554592 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 K7EMI3 77 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 SNAI2O43623 268 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 SPANXN1Q5VSR9 72 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 LYZL1Q6UWQ5 148 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 AP1S3Q96PC3 154 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 TMEM243Q9BU79 118 aa2.9□□□□□ -1.95
ATXN3-228ENST00000554592 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
ATXN3-228ENST00000554592 A0A1B0GWB2 263 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 H3BRM9 83 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 CCL25O15444 150 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 ATP5LO75964 103 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 HBDP02042 147 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 SMIM17P0DL12 118 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-228ENST00000554592 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
ATXN3-228ENST00000554592 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-228ENST00000554592 PRELID3AQ96N28 172 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-228ENST00000554592 D6R8Y8 96 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 H0Y9J4 135 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 M0QY20 66 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 UBE2L6O14933 153 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 PPP1R17O96001 155 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 FCER1GP30273 86 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 RPL13AP40429 203 aaKnown RBP2.88□□□□□ -1.95
ATXN3-228ENST00000554592 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 CEND1Q8N111 149 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 MAP1LC3AQ9H492 121 aa2.88□□□□□ -1.95
ATXN3-228ENST00000554592 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 FGF6P10767 208 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 CKS2P33552 79 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-228ENST00000554592 UBE2D1P51668 147 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 SYCNQ0VAF6 134 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 MRPL51Q4U2R6 128 aaKnown RBP2.87□□□□□ -1.95
ATXN3-228ENST00000554592 AMN1Q8IY45 258 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 Q8N8P6 123 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 MRAP2Q96G30 205 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 VCX2Q9H322 139 aa2.87□□□□□ -1.95
ATXN3-228ENST00000554592 A0A096LNJ9 63 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 MGPP08493 103 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 PLNP26678 52 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 COTL1Q14019 142 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-228ENST00000554592 AMMECR1LQ6DCA0 310 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
ATXN3-228ENST00000554592 LINC00526Q96FQ7 95 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
ATXN3-228ENST00000554592 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 K7EP34 96 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms