RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 Q6ZRP5 223 aa5.25□□□□□ -1.57
PSEN1-209ENST00000553855 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
PSEN1-209ENST00000553855 ZNF22P17026 224 aaPredicted RBP5.24□□□□□ -1.57
PSEN1-209ENST00000553855 UBE2BP63146 152 aa5.24□□□□□ -1.57
PSEN1-209ENST00000553855 A0A1W2PNN7 141 aa5.23□□□□□ -1.57
PSEN1-209ENST00000553855 C11orf86A6NJI1 115 aa5.23□□□□□ -1.57
PSEN1-209ENST00000553855 FABP4P15090 132 aa5.23□□□□□ -1.57
PSEN1-209ENST00000553855 FAM19A5Q7Z5A7 132 aaPredicted RBP5.23□□□□□ -1.57
PSEN1-209ENST00000553855 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
PSEN1-209ENST00000553855 MAP1LC3CQ9BXW4 147 aa5.23□□□□□ -1.57
PSEN1-209ENST00000553855 M0QXV9 152 aa5.22□□□□□ -1.57
PSEN1-209ENST00000553855 PLNP26678 52 aa5.22□□□□□ -1.57
PSEN1-209ENST00000553855 HERVK_113P61574 105 aa5.22□□□□□ -1.57
PSEN1-209ENST00000553855 LBHQ53QV2 105 aaPredicted RBP5.22□□□□□ -1.57
PSEN1-209ENST00000553855 S100A6P06703 90 aa5.21□□□□□ -1.58
PSEN1-209ENST00000553855 PFN2P35080 140 aa5.21□□□□□ -1.58
PSEN1-209ENST00000553855 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
PSEN1-209ENST00000553855 PHF5AQ7RTV0 110 aaKnown RBP5.21□□□□□ -1.58
PSEN1-209ENST00000553855 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
PSEN1-209ENST00000553855 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 LINC00587B1AMM8 73 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BKO60814 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 DPM2O94777 84 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 OXTP01178 125 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BJP06899 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BOP23527 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BBP33778 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BDP58876 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BCP62807 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 COX17Q14061 63 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST2H2BEQ16778 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.2□□□□□ -1.58
PSEN1-209ENST00000553855 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BHQ93079 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BNQ99877 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 HIST1H2BMQ99879 126 aa5.2□□□□□ -1.58
PSEN1-209ENST00000553855 FAM168BA1KXE4 195 aa5.19□□□□□ -1.58
PSEN1-209ENST00000553855 HERV-K104P63124 156 aa5.19□□□□□ -1.58
PSEN1-209ENST00000553855 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
PSEN1-209ENST00000553855 C1orf137Q5JT78 98 aa5.19□□□□□ -1.58
PSEN1-209ENST00000553855 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
PSEN1-209ENST00000553855 ZNF625Q96I27 306 aaPredicted RBP5.19□□□□□ -1.58
PSEN1-209ENST00000553855 ERG28Q9UKR5 140 aa5.19□□□□□ -1.58
PSEN1-209ENST00000553855 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
PSEN1-209ENST00000553855 NUPR1O60356 82 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 IGKCP01834 107 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 LINC00158P58513 81 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
PSEN1-209ENST00000553855 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
PSEN1-209ENST00000553855 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 PSORS1C2Q9UIG4 136 aa5.18□□□□□ -1.58
PSEN1-209ENST00000553855 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
PSEN1-209ENST00000553855 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
PSEN1-209ENST00000553855 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
PSEN1-209ENST00000553855 TP73-AS1Q9UF72 201 aa5.17□□□□□ -1.58
PSEN1-209ENST00000553855 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
PSEN1-209ENST00000553855 C22orf24Q9Y442 160 aa5.17□□□□□ -1.58
PSEN1-209ENST00000553855 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
PSEN1-209ENST00000553855 DMBT1Q9UGM3 2413 aaPredicted RBP5.16□□□□□ -1.58
PSEN1-209ENST00000553855 IGLV5-37A0A075B6J1 123 aa5.16□□□□□ -1.58
PSEN1-209ENST00000553855 C20orf202A1L168 122 aa5.16□□□□□ -1.58
PSEN1-209ENST00000553855 LEPROTO15243 131 aa5.16□□□□□ -1.58
PSEN1-209ENST00000553855 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
PSEN1-209ENST00000553855 A0A0U1RRA0 63 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 SYS1-DBNDD2H3BUS1 97 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 NMUP48645 174 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 AKR1D1P51857 326 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 DIRC1Q969H9 104 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 SND1-IT1Q9HBX3 110 aa5.15□□□□□ -1.59
PSEN1-209ENST00000553855 J3QQQ9 107 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 S100A2P29034 98 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
PSEN1-209ENST00000553855 KRTDAPP60985 99 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 S100A12P80511 92 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 MIEN1Q9BRT3 115 aa5.14□□□□□ -1.59
PSEN1-209ENST00000553855 SMIM6P0DI80 62 aa5.13□□□□□ -1.59
PSEN1-209ENST00000553855 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
PSEN1-209ENST00000553855 COA6Q5JTJ3 125 aaKnown RBP5.13□□□□□ -1.59
PSEN1-209ENST00000553855 LINC00167Q96N53 147 aa5.13□□□□□ -1.59
PSEN1-209ENST00000553855 FLG2Q5D862 2391 aaPredicted RBP5.12□□□□□ -1.59
PSEN1-209ENST00000553855 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
PSEN1-209ENST00000553855 RPL28P46779 137 aaKnown RBP5.12□□□□□ -1.59
PSEN1-209ENST00000553855 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
PSEN1-209ENST00000553855 E9PLD3 99 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 C3orf79P0CE67 100 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 UBE2AP49459 152 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.59
PSEN1-209ENST00000553855 LINC01545Q5VT33 79 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 BOD1L2Q8IYS8 172 aa5.11□□□□□ -1.59
PSEN1-209ENST00000553855 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
PSEN1-209ENST00000553855 M0R378 163 aa5.1□□□□□ -1.59
PSEN1-209ENST00000553855 ZNF861PO60384 105 aa5.1□□□□□ -1.59
PSEN1-209ENST00000553855 BCE1O60756 84 aa5.1□□□□□ -1.59
PSEN1-209ENST00000553855 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms