RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PFN2P35080 140 aa14.66□□□□□ -0.06
TDP1-205ENST00000553527 HERV-K104P63124 156 aa14.66□□□□□ -0.06
TDP1-205ENST00000553527 MEIG1Q5JSS6 88 aa14.64□□□□□ -0.07
TDP1-205ENST00000553527 FAM19A5Q7Z5A7 132 aaPredicted RBP14.64□□□□□ -0.07
TDP1-205ENST00000553527 COX17Q14061 63 aa14.63□□□□□ -0.07
TDP1-205ENST00000553527 ANKRD39Q53RE8 183 aa14.63□□□□□ -0.07
TDP1-205ENST00000553527 IGKV2D-26A0A0A0MRZ7 120 aa14.62□□□□□ -0.07
TDP1-205ENST00000553527 HSBP1L1C9JCN9 74 aa14.61□□□□□ -0.07
TDP1-205ENST00000553527 XAGE1AQ9HD64 81 aa14.61□□□□□ -0.07
TDP1-205ENST00000553527 LINC00158P58513 81 aa14.6□□□□□ -0.07
TDP1-205ENST00000553527 C9orf129Q5T035 196 aaKnown RBP14.6□□□□□ -0.07
TDP1-205ENST00000553527 A0A0U1RRA0 63 aa14.59□□□□□ -0.07
TDP1-205ENST00000553527 LINC00587B1AMM8 73 aa14.59□□□□□ -0.07
TDP1-205ENST00000553527 PSORS1C2Q9UIG4 136 aa14.59□□□□□ -0.07
TDP1-205ENST00000553527 SMIM13P0DJ93 91 aa14.58□□□□□ -0.08
TDP1-205ENST00000553527 ZNF815PA8K554 130 aa14.57□□□□□ -0.08
TDP1-205ENST00000553527 JOSD1Q15040 202 aaPredicted RBP14.56□□□□□ -0.08
TDP1-205ENST00000553527 C1orf137Q5JT78 98 aa14.56□□□□□ -0.08
TDP1-205ENST00000553527 SPINK6Q6UWN8 80 aa14.55□□□□□ -0.08
TDP1-205ENST00000553527 KRTAP7-1Q8IUC3 87 aa14.55□□□□□ -0.08
TDP1-205ENST00000553527 TTTY13Q9BZ97 58 aa14.55□□□□□ -0.08
TDP1-205ENST00000553527 SND1-IT1Q9HBX3 110 aa14.55□□□□□ -0.08
TDP1-205ENST00000553527 A0A0J9YXY3 114 aa14.54□□□□□ -0.08
TDP1-205ENST00000553527 M0QXV9 152 aa14.54□□□□□ -0.08
TDP1-205ENST00000553527 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
TDP1-205ENST00000553527 KRTAP11-1Q8IUC1 163 aa14.52□□□□□ -0.09
TDP1-205ENST00000553527 MIR7-3HGQ8N6C7 128 aa14.52□□□□□ -0.09
TDP1-205ENST00000553527 UBE2BP63146 152 aa14.51□□□□□ -0.09
TDP1-205ENST00000553527 MT1HL1P0DM35 61 aa14.5□□□□□ -0.09
TDP1-205ENST00000553527 SERTAD4-AS1Q5TG53 156 aa14.5□□□□□ -0.09
TDP1-205ENST00000553527 PCP2Q8IVA1 136 aa14.5□□□□□ -0.09
TDP1-205ENST00000553527 REG3GQ6UW15 175 aa14.48□□□□□ -0.09
TDP1-205ENST00000553527 SCGB1D4Q6XE38 83 aa14.48□□□□□ -0.09
TDP1-205ENST00000553527 DAND5Q8N907 189 aa14.48□□□□□ -0.09
TDP1-205ENST00000553527 VAMP8Q9BV40 100 aa14.47□□□□□ -0.09
TDP1-205ENST00000553527 PLA2G2DQ9UNK4 145 aa14.47□□□□□ -0.09
TDP1-205ENST00000553527 PYY3Q5JQD4 70 aa14.46□□□□□ -0.09
TDP1-205ENST00000553527 LINC01600Q96MT4 127 aa14.46□□□□□ -0.09
TDP1-205ENST00000553527 TIMM17BO60830 172 aa14.45□□□□□ -0.1
TDP1-205ENST00000553527 PAM16Q9Y3D7 125 aa14.45□□□□□ -0.1
TDP1-205ENST00000553527 C22orf24Q9Y442 160 aa14.45□□□□□ -0.1
TDP1-205ENST00000553527 IGLV7-43P04211 117 aa14.44□□□□□ -0.1
TDP1-205ENST00000553527 NKAPP1Q8N9T2 125 aa14.44□□□□□ -0.1
TDP1-205ENST00000553527 RPL24P83731 157 aaKnown RBP14.43□□□□□ -0.1
TDP1-205ENST00000553527 SPATA45Q537H7 98 aa14.43□□□□□ -0.1
TDP1-205ENST00000553527 ADAMTSL4-AS1Q5T5F5 129 aa14.43□□□□□ -0.1
TDP1-205ENST00000553527 MIEN1Q9BRT3 115 aa14.43□□□□□ -0.1
TDP1-205ENST00000553527 LITAFQ99732 161 aa14.42□□□□□ -0.1
TDP1-205ENST00000553527 IGLV5-37A0A075B6J1 123 aa14.41□□□□□ -0.1
TDP1-205ENST00000553527 TMEM238C9JI98 176 aa14.41□□□□□ -0.1
TDP1-205ENST00000553527 VPREB1P12018 145 aa14.41□□□□□ -0.1
TDP1-205ENST00000553527 BOD1L2Q8IYS8 172 aa14.41□□□□□ -0.1
TDP1-205ENST00000553527 TP73-AS1Q9UF72 201 aa14.41□□□□□ -0.1
TDP1-205ENST00000553527 NPC2P61916 151 aa14.4□□□□□ -0.1
TDP1-205ENST00000553527 LBHQ53QV2 105 aaPredicted RBP14.4□□□□□ -0.1
TDP1-205ENST00000553527 MRPL55Q7Z7F7 128 aaKnown RBP14.4□□□□□ -0.1
TDP1-205ENST00000553527 Q8NDZ9 215 aa14.39□□□□□ -0.11
TDP1-205ENST00000553527 COX8AP10176 69 aa14.38□□□□□ -0.11
TDP1-205ENST00000553527 LOC107984156A0A0G2JMH3 177 aa14.36□□□□□ -0.11
TDP1-205ENST00000553527 ARL17AQ8IVW1 177 aa14.36□□□□□ -0.11
TDP1-205ENST00000553527 DIRC1Q969H9 104 aa14.36□□□□□ -0.11
TDP1-205ENST00000553527 GAGE10A6NGK3 116 aa14.35□□□□□ -0.11
TDP1-205ENST00000553527 SOSTDC1Q6X4U4 206 aa14.35□□□□□ -0.11
TDP1-205ENST00000553527 SPANXDQ9BXN6 97 aa14.35□□□□□ -0.11
TDP1-205ENST00000553527 SPANXCQ9NY87 97 aa14.35□□□□□ -0.11
TDP1-205ENST00000553527 RPL37AP8A6NKH3 93 aa14.34□□□□□ -0.11
TDP1-205ENST00000553527 LINC00308Q8TCZ7 52 aa14.34□□□□□ -0.11
TDP1-205ENST00000553527 C14orf144Q96I85 54 aa14.34□□□□□ -0.11
TDP1-205ENST00000553527 TNXBP22105 4242 aa14.33□□□□□ -0.12
TDP1-205ENST00000553527 LINC00167Q96N53 147 aa14.33□□□□□ -0.12
TDP1-205ENST00000553527 NCR3O14931 201 aa14.32□□□□□ -0.12
TDP1-205ENST00000553527 DLEU1O43261 78 aa14.32□□□□□ -0.12
TDP1-205ENST00000553527 KRTAP10-8P60410 259 aa14.32□□□□□ -0.12
TDP1-205ENST00000553527 H0Y9J4 135 aa14.31□□□□□ -0.12
TDP1-205ENST00000553527 EIF4EBP3O60516 100 aaPredicted RBP14.31□□□□□ -0.12
TDP1-205ENST00000553527 Q6ZVH6 145 aa14.31□□□□□ -0.12
TDP1-205ENST00000553527 COPS9Q8WXC6 57 aa14.31□□□□□ -0.12
TDP1-205ENST00000553527 M0R378 163 aa14.3□□□□□ -0.12
TDP1-205ENST00000553527 S100A12P80511 92 aa14.3□□□□□ -0.12
TDP1-205ENST00000553527 NDUFC2O95298 119 aa14.29□□□□□ -0.12
TDP1-205ENST00000553527 SLC25A34Q6PIV7 304 aa14.29□□□□□ -0.12
TDP1-205ENST00000553527 SPANXB1Q9NS25 103 aaPredicted RBP14.29□□□□□ -0.12
TDP1-205ENST00000553527 IFITM1P13164 125 aa14.28□□□□□ -0.12
TDP1-205ENST00000553527 IGKV2-28A0A075B6P5 120 aa14.27□□□□□ -0.13
TDP1-205ENST00000553527 IGKV2D-28P01615 120 aa14.27□□□□□ -0.13
TDP1-205ENST00000553527 LOC105371267A0A1B0GV96 52 aa14.26□□□□□ -0.13
TDP1-205ENST00000553527 SMIM6P0DI80 62 aa14.26□□□□□ -0.13
TDP1-205ENST00000553527 TRBV10-2A0A0K0K1G8 114 aa14.25□□□□□ -0.13
TDP1-205ENST00000553527 ZNF861PO60384 105 aa14.25□□□□□ -0.13
TDP1-205ENST00000553527 PRR26Q8N8Z3 221 aa14.25□□□□□ -0.13
TDP1-205ENST00000553527 IGLV1-50A0A075B6I6 118 aa14.24□□□□□ -0.13
TDP1-205ENST00000553527 MUSTN1Q8IVN3 82 aa14.24□□□□□ -0.13
TDP1-205ENST00000553527 PPDPFQ9H3Y8 114 aa14.24□□□□□ -0.13
TDP1-205ENST00000553527 BCE1O60756 84 aa14.22□□□□□ -0.13
TDP1-205ENST00000553527 HIST1H4GQ99525 98 aa14.21□□□□□ -0.13
TDP1-205ENST00000553527 HIGD1BQ9P298 99 aa14.21□□□□□ -0.13
TDP1-205ENST00000553527 S100A7L2Q5SY68 101 aa14.2□□□□□ -0.14
TDP1-205ENST00000553527 HMCN2Q8NDA2 5059 aa14.19□□□□□ -0.14
TDP1-205ENST00000553527 TRBV10-3A0A0K0K1G6 114 aa14.19□□□□□ -0.14
TDP1-205ENST00000553527 DDTP30046 118 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms