RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KRTAP4-5Q9BYR2 181 aa9.27□□□□□ -0.93
MTHFD1-204ENST00000553405 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
MTHFD1-204ENST00000553405 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 LOC107984156A0A0G2JMH3 177 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 LINC00158P58513 81 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 ARL17AQ8IVW1 177 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
MTHFD1-204ENST00000553405 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
MTHFD1-204ENST00000553405 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-204ENST00000553405 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-204ENST00000553405 KRTAP11-1Q8IUC1 163 aa9.25□□□□□ -0.93
MTHFD1-204ENST00000553405 DAND5Q8N907 189 aa9.25□□□□□ -0.93
MTHFD1-204ENST00000553405 TIMM17BO60830 172 aa9.24□□□□□ -0.93
MTHFD1-204ENST00000553405 VPREB1P12018 145 aa9.24□□□□□ -0.93
MTHFD1-204ENST00000553405 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-204ENST00000553405 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
MTHFD1-204ENST00000553405 TP73-AS1Q9UF72 201 aa9.23□□□□□ -0.93
MTHFD1-204ENST00000553405 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
MTHFD1-204ENST00000553405 FAT3Q8TDW7 4589 aa9.22□□□□□ -0.93
MTHFD1-204ENST00000553405 HSBP1L1C9JCN9 74 aa9.22□□□□□ -0.93
MTHFD1-204ENST00000553405 M0QXV9 152 aa9.22□□□□□ -0.93
MTHFD1-204ENST00000553405 Q5VSD8 79 aa9.22□□□□□ -0.93
MTHFD1-204ENST00000553405 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
MTHFD1-204ENST00000553405 BOD1L2Q8IYS8 172 aa9.2□□□□□ -0.94
MTHFD1-204ENST00000553405 COX8AP10176 69 aa9.19□□□□□ -0.94
MTHFD1-204ENST00000553405 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
MTHFD1-204ENST00000553405 LOC105371267A0A1B0GV96 52 aa9.18□□□□□ -0.94
MTHFD1-204ENST00000553405 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-204ENST00000553405 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
MTHFD1-204ENST00000553405 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
MTHFD1-204ENST00000553405 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
MTHFD1-204ENST00000553405 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 DLEU1O43261 78 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 LINC00308Q8TCZ7 52 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
MTHFD1-204ENST00000553405 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-204ENST00000553405 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
MTHFD1-204ENST00000553405 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-204ENST00000553405 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-204ENST00000553405 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
MTHFD1-204ENST00000553405 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
MTHFD1-204ENST00000553405 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
MTHFD1-204ENST00000553405 NPC2P61916 151 aa9.14□□□□□ -0.95
MTHFD1-204ENST00000553405 LBHQ53QV2 105 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-204ENST00000553405 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
MTHFD1-204ENST00000553405 GAGE10A6NGK3 116 aa9.13□□□□□ -0.95
MTHFD1-204ENST00000553405 NDUFC2O95298 119 aa9.13□□□□□ -0.95
MTHFD1-204ENST00000553405 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-204ENST00000553405 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
MTHFD1-204ENST00000553405 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-204ENST00000553405 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
MTHFD1-204ENST00000553405 C2orf91Q6ZV80 131 aa9.12□□□□□ -0.95
MTHFD1-204ENST00000553405 Q6ZVH6 145 aa9.12□□□□□ -0.95
MTHFD1-204ENST00000553405 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
MTHFD1-204ENST00000553405 TRBV10-2A0A0K0K1G8 114 aa9.11□□□□□ -0.95
MTHFD1-204ENST00000553405 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
MTHFD1-204ENST00000553405 M0R378 163 aa9.11□□□□□ -0.95
MTHFD1-204ENST00000553405 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
MTHFD1-204ENST00000553405 NCR3O14931 201 aa9.1□□□□□ -0.95
MTHFD1-204ENST00000553405 IFITM1P13164 125 aa9.1□□□□□ -0.95
MTHFD1-204ENST00000553405 UBE2BP63146 152 aa9.1□□□□□ -0.95
MTHFD1-204ENST00000553405 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-204ENST00000553405 SMIM6P0DI80 62 aa9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 MIEN1Q9BRT3 115 aa9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
MTHFD1-204ENST00000553405 TNXBP22105 4242 aa9.08□□□□□ -0.96
MTHFD1-204ENST00000553405 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-204ENST00000553405 TRBV10-3A0A0K0K1G6 114 aa9.07□□□□□ -0.96
MTHFD1-204ENST00000553405 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
MTHFD1-204ENST00000553405 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
MTHFD1-204ENST00000553405 KRTAP13-1Q8IUC0 172 aa9.07□□□□□ -0.96
MTHFD1-204ENST00000553405 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
MTHFD1-204ENST00000553405 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
MTHFD1-204ENST00000553405 KCNQ1DNQ9H478 68 aa9.06□□□□□ -0.96
MTHFD1-204ENST00000553405 KRTAP4-16G5E9R7 235 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-204ENST00000553405 SPRR1AP35321 89 aa9.05□□□□□ -0.96
MTHFD1-204ENST00000553405 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
MTHFD1-204ENST00000553405 BCE1O60756 84 aa9.04□□□□□ -0.96
MTHFD1-204ENST00000553405 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
MTHFD1-204ENST00000553405 PRYO14603 147 aa9.02□□□□□ -0.97
MTHFD1-204ENST00000553405 INAFM2P0DMQ5 153 aa9.02□□□□□ -0.97
MTHFD1-204ENST00000553405 DDTP30046 118 aa9.02□□□□□ -0.97
MTHFD1-204ENST00000553405 S100A12P80511 92 aa9.02□□□□□ -0.97
MTHFD1-204ENST00000553405 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
MTHFD1-204ENST00000553405 A4D1N5 150 aa9□□□□□ -0.97
MTHFD1-204ENST00000553405 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
MTHFD1-204ENST00000553405 LINC00518Q8N0U6 118 aa9□□□□□ -0.97
MTHFD1-204ENST00000553405 HIST1H4GQ99525 98 aa9□□□□□ -0.97
MTHFD1-204ENST00000553405 UQCR10Q9UDW1 63 aa9□□□□□ -0.97
MTHFD1-204ENST00000553405 ZNF861PO60384 105 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms