RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
SCN8A-207ENST00000551216 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
SCN8A-207ENST00000551216 DNAL4O96015 105 aa9.6□□□□□ -0.87
SCN8A-207ENST00000551216 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
SCN8A-207ENST00000551216 SNCGO76070 127 aa9.59□□□□□ -0.87
SCN8A-207ENST00000551216 SYCNQ0VAF6 134 aa9.59□□□□□ -0.87
SCN8A-207ENST00000551216 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
SCN8A-207ENST00000551216 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
SCN8A-207ENST00000551216 Q6ZRU5 148 aa9.58□□□□□ -0.88
SCN8A-207ENST00000551216 FAM218AQ96MZ4 157 aa9.58□□□□□ -0.88
SCN8A-207ENST00000551216 Q9HAA7 133 aa9.57□□□□□ -0.88
SCN8A-207ENST00000551216 BAALC-AS2P0C853 105 aa9.56□□□□□ -0.88
SCN8A-207ENST00000551216 TLX1NBP0CAT3 122 aa9.56□□□□□ -0.88
SCN8A-207ENST00000551216 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
SCN8A-207ENST00000551216 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
SCN8A-207ENST00000551216 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
SCN8A-207ENST00000551216 NUPR2A6NF83 97 aa9.55□□□□□ -0.88
SCN8A-207ENST00000551216 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
SCN8A-207ENST00000551216 NCR3O14931 201 aa9.54□□□□□ -0.88
SCN8A-207ENST00000551216 Q8NDZ9 215 aa9.54□□□□□ -0.88
SCN8A-207ENST00000551216 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
SCN8A-207ENST00000551216 A0A087WYN8 130 aa9.53□□□□□ -0.88
SCN8A-207ENST00000551216 HUWE1Q7Z6Z7 4374 aaKnown RBP9.53□□□□□ -0.88
SCN8A-207ENST00000551216 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
SCN8A-207ENST00000551216 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
SCN8A-207ENST00000551216 M0R378 163 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 LECT2O14960 151 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 VPREB1P12018 145 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
SCN8A-207ENST00000551216 SIGMAR1Q99720 223 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
SCN8A-207ENST00000551216 H3BQ85 93 aa9.51□□□□□ -0.89
SCN8A-207ENST00000551216 C6orf99Q4VX62 202 aa9.51□□□□□ -0.89
SCN8A-207ENST00000551216 Q8N814 137 aa9.51□□□□□ -0.89
SCN8A-207ENST00000551216 ORMDL1Q9P0S3 153 aa9.51□□□□□ -0.89
SCN8A-207ENST00000551216 ACYP1P07311 99 aa9.5□□□□□ -0.89
SCN8A-207ENST00000551216 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
SCN8A-207ENST00000551216 Q6ZRP5 223 aa9.49□□□□□ -0.89
SCN8A-207ENST00000551216 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
SCN8A-207ENST00000551216 TRAV23DV6A0A075B6W5 121 aa9.49□□□□□ -0.89
SCN8A-207ENST00000551216 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 GHRHP01286 108 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 TTC32Q5I0X7 151 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
SCN8A-207ENST00000551216 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
SCN8A-207ENST00000551216 OBSCN-AS1Q96MR7 158 aa9.47□□□□□ -0.89
SCN8A-207ENST00000551216 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
SCN8A-207ENST00000551216 SCGB1A1P11684 91 aa9.46□□□□□ -0.89
SCN8A-207ENST00000551216 GAGE2EQ4V326 116 aa9.46□□□□□ -0.89
SCN8A-207ENST00000551216 GAGE2DQ9UEU5 116 aa9.46□□□□□ -0.89
SCN8A-207ENST00000551216 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
SCN8A-207ENST00000551216 ZNF73O43830 326 aaPredicted RBP9.45□□□□□ -0.9
SCN8A-207ENST00000551216 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
SCN8A-207ENST00000551216 hADV29S1A0JD25 119 aa9.45□□□□□ -0.9
SCN8A-207ENST00000551216 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
SCN8A-207ENST00000551216 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
SCN8A-207ENST00000551216 SLPIP03973 132 aa9.44□□□□□ -0.9
SCN8A-207ENST00000551216 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
SCN8A-207ENST00000551216 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
SCN8A-207ENST00000551216 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
SCN8A-207ENST00000551216 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SCN8A-207ENST00000551216 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
SCN8A-207ENST00000551216 NKAPP1Q8N9T2 125 aa9.42□□□□□ -0.9
SCN8A-207ENST00000551216 KRTAP1-5Q9BYS1 174 aa9.42□□□□□ -0.9
SCN8A-207ENST00000551216 COX7BP24311 80 aa9.42□□□□□ -0.9
SCN8A-207ENST00000551216 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
SCN8A-207ENST00000551216 PSCAO43653 123 aa9.41□□□□□ -0.9
SCN8A-207ENST00000551216 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
SCN8A-207ENST00000551216 PCP4P48539 62 aa9.4□□□□□ -0.9
SCN8A-207ENST00000551216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-207ENST00000551216 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
SCN8A-207ENST00000551216 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
SCN8A-207ENST00000551216 XGP55808 180 aa9.38□□□□□ -0.91
SCN8A-207ENST00000551216 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
SCN8A-207ENST00000551216 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
SCN8A-207ENST00000551216 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
SCN8A-207ENST00000551216 PRYO14603 147 aa9.35□□□□□ -0.91
SCN8A-207ENST00000551216 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
SCN8A-207ENST00000551216 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
SCN8A-207ENST00000551216 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
SCN8A-207ENST00000551216 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
SCN8A-207ENST00000551216 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SCN8A-207ENST00000551216 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
SCN8A-207ENST00000551216 PDE6GP18545 87 aa9.33□□□□□ -0.92
SCN8A-207ENST00000551216 Q6Q795 121 aa9.33□□□□□ -0.92
SCN8A-207ENST00000551216 Q6ZQY7 126 aa9.33□□□□□ -0.92
SCN8A-207ENST00000551216 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
SCN8A-207ENST00000551216 SPRR1AP35321 89 aa9.32□□□□□ -0.92
SCN8A-207ENST00000551216 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
SCN8A-207ENST00000551216 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
SCN8A-207ENST00000551216 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
SCN8A-207ENST00000551216 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
SCN8A-207ENST00000551216 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
SCN8A-207ENST00000551216 CCKP06307 115 aa9.31□□□□□ -0.92
SCN8A-207ENST00000551216 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms