RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 TRACP01848 142 aa10.35□□□□□ -0.75
SCN8A-206ENST00000550891 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
SCN8A-206ENST00000550891 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
SCN8A-206ENST00000550891 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
SCN8A-206ENST00000550891 Q6ZRU5 148 aa10.33□□□□□ -0.76
SCN8A-206ENST00000550891 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
SCN8A-206ENST00000550891 F8WDY8 70 aa10.32□□□□□ -0.76
SCN8A-206ENST00000550891 SYCNQ0VAF6 134 aa10.32□□□□□ -0.76
SCN8A-206ENST00000550891 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
SCN8A-206ENST00000550891 SNCGO76070 127 aa10.31□□□□□ -0.76
SCN8A-206ENST00000550891 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
SCN8A-206ENST00000550891 RPL18AQ02543 176 aaKnown RBP10.3□□□□□ -0.76
SCN8A-206ENST00000550891 FAM218AQ96MZ4 157 aa10.3□□□□□ -0.76
SCN8A-206ENST00000550891 NDUFC2-KCTD14E9PQ53 114 aa10.29□□□□□ -0.76
SCN8A-206ENST00000550891 BAALC-AS2P0C853 105 aa10.29□□□□□ -0.76
SCN8A-206ENST00000550891 GAGE2EQ4V326 116 aa10.29□□□□□ -0.76
SCN8A-206ENST00000550891 GAGE2DQ9UEU5 116 aa10.29□□□□□ -0.76
SCN8A-206ENST00000550891 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
SCN8A-206ENST00000550891 LECT2O14960 151 aa10.28□□□□□ -0.76
SCN8A-206ENST00000550891 LINC01600Q96MT4 127 aa10.28□□□□□ -0.76
SCN8A-206ENST00000550891 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
SCN8A-206ENST00000550891 A0A087WYN8 130 aa10.27□□□□□ -0.77
SCN8A-206ENST00000550891 C6orf99Q4VX62 202 aa10.25□□□□□ -0.77
SCN8A-206ENST00000550891 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
SCN8A-206ENST00000550891 Q8NDZ9 215 aa10.25□□□□□ -0.77
SCN8A-206ENST00000550891 PSCAO43653 123 aa10.24□□□□□ -0.77
SCN8A-206ENST00000550891 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
SCN8A-206ENST00000550891 SIGMAR1Q99720 223 aa10.21□□□□□ -0.77
SCN8A-206ENST00000550891 ORMDL1Q9P0S3 153 aa10.21□□□□□ -0.77
SCN8A-206ENST00000550891 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.78
SCN8A-206ENST00000550891 A0A1B0GX51 115 aa10.21□□□□□ -0.78
SCN8A-206ENST00000550891 CASC10Q5T4H9 136 aa10.21□□□□□ -0.78
SCN8A-206ENST00000550891 Q6ZRP5 223 aa10.21□□□□□ -0.78
SCN8A-206ENST00000550891 HUWE1Q7Z6Z7 4374 aaKnown RBP10.21□□□□□ -0.78
SCN8A-206ENST00000550891 IGLV6-57P01721 117 aa10.2□□□□□ -0.78
SCN8A-206ENST00000550891 TRAV23DV6A0A075B6W5 121 aa10.2□□□□□ -0.78
SCN8A-206ENST00000550891 M0R378 163 aa10.2□□□□□ -0.78
SCN8A-206ENST00000550891 NKAPP1Q8N9T2 125 aa10.2□□□□□ -0.78
SCN8A-206ENST00000550891 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
SCN8A-206ENST00000550891 VPREB1P12018 145 aa10.19□□□□□ -0.78
SCN8A-206ENST00000550891 SLPIP03973 132 aa10.18□□□□□ -0.78
SCN8A-206ENST00000550891 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
SCN8A-206ENST00000550891 Q8N814 137 aa10.18□□□□□ -0.78
SCN8A-206ENST00000550891 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
SCN8A-206ENST00000550891 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.78
SCN8A-206ENST00000550891 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
SCN8A-206ENST00000550891 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
SCN8A-206ENST00000550891 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
SCN8A-206ENST00000550891 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.79
SCN8A-206ENST00000550891 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
SCN8A-206ENST00000550891 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
SCN8A-206ENST00000550891 PCP4P48539 62 aa10.14□□□□□ -0.79
SCN8A-206ENST00000550891 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
SCN8A-206ENST00000550891 CDIP1Q9H305 208 aa10.13□□□□□ -0.79
SCN8A-206ENST00000550891 TMEM256-PLSCR3K7ERE1 68 aa10.13□□□□□ -0.79
SCN8A-206ENST00000550891 COX7BP24311 80 aa10.13□□□□□ -0.79
SCN8A-206ENST00000550891 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
SCN8A-206ENST00000550891 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
SCN8A-206ENST00000550891 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
SCN8A-206ENST00000550891 A0A1B0GV72 72 aa10.1□□□□□ -0.79
SCN8A-206ENST00000550891 ACYP1P07311 99 aa10.09□□□□□ -0.79
SCN8A-206ENST00000550891 NBDYA0A0U1RRE5 68 aa10.09□□□□□ -0.79
SCN8A-206ENST00000550891 GHRHP01286 108 aa10.09□□□□□ -0.79
SCN8A-206ENST00000550891 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
SCN8A-206ENST00000550891 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
SCN8A-206ENST00000550891 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 XGP55808 180 aa10.08□□□□□ -0.8
SCN8A-206ENST00000550891 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-206ENST00000550891 Q6ZQY7 126 aa10.07□□□□□ -0.8
SCN8A-206ENST00000550891 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
SCN8A-206ENST00000550891 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
SCN8A-206ENST00000550891 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
SCN8A-206ENST00000550891 H3BQ85 93 aa10.06□□□□□ -0.8
SCN8A-206ENST00000550891 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
SCN8A-206ENST00000550891 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
SCN8A-206ENST00000550891 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
SCN8A-206ENST00000550891 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
SCN8A-206ENST00000550891 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
SCN8A-206ENST00000550891 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
SCN8A-206ENST00000550891 M0R2N4 97 aa10.03□□□□□ -0.8
SCN8A-206ENST00000550891 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
SCN8A-206ENST00000550891 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
SCN8A-206ENST00000550891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.03□□□□□ -0.8
SCN8A-206ENST00000550891 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.8
SCN8A-206ENST00000550891 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.8
SCN8A-206ENST00000550891 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
SCN8A-206ENST00000550891 SCGB1A1P11684 91 aa10.01□□□□□ -0.81
SCN8A-206ENST00000550891 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
SCN8A-206ENST00000550891 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
SCN8A-206ENST00000550891 ETDCA0A1B0GVM5 59 aa10.01□□□□□ -0.81
SCN8A-206ENST00000550891 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
SCN8A-206ENST00000550891 C16orf90A8MZG2 172 aa10□□□□□ -0.81
SCN8A-206ENST00000550891 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
SCN8A-206ENST00000550891 PRYO14603 147 aa9.99□□□□□ -0.81
SCN8A-206ENST00000550891 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
SCN8A-206ENST00000550891 RBM3P98179 157 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms