RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
ERBB3-215ENST00000550828 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.05
ERBB3-215ENST00000550828 COX8AP10176 69 aa8.51□□□□□ -1.05
ERBB3-215ENST00000550828 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
ERBB3-215ENST00000550828 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
ERBB3-215ENST00000550828 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
ERBB3-215ENST00000550828 FAT1Q14517 4588 aa8.51□□□□□ -1.05
ERBB3-215ENST00000550828 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
ERBB3-215ENST00000550828 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
ERBB3-215ENST00000550828 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
ERBB3-215ENST00000550828 TIMM17BO60830 172 aa8.49□□□□□ -1.05
ERBB3-215ENST00000550828 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
ERBB3-215ENST00000550828 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
ERBB3-215ENST00000550828 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
ERBB3-215ENST00000550828 DLEU1O43261 78 aa8.47□□□□□ -1.05
ERBB3-215ENST00000550828 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 VPREB1P12018 145 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 NPC2P61916 151 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.06
ERBB3-215ENST00000550828 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
ERBB3-215ENST00000550828 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
ERBB3-215ENST00000550828 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
ERBB3-215ENST00000550828 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
ERBB3-215ENST00000550828 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
ERBB3-215ENST00000550828 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
ERBB3-215ENST00000550828 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
ERBB3-215ENST00000550828 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
ERBB3-215ENST00000550828 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
ERBB3-215ENST00000550828 M0QXV9 152 aa8.43□□□□□ -1.06
ERBB3-215ENST00000550828 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
ERBB3-215ENST00000550828 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
ERBB3-215ENST00000550828 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
ERBB3-215ENST00000550828 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
ERBB3-215ENST00000550828 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
ERBB3-215ENST00000550828 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
ERBB3-215ENST00000550828 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
ERBB3-215ENST00000550828 S100A12P80511 92 aa8.41□□□□□ -1.06
ERBB3-215ENST00000550828 PRO1933Q9H354 126 aa8.41□□□□□ -1.06
ERBB3-215ENST00000550828 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
ERBB3-215ENST00000550828 C12orf57Q99622 126 aa8.4□□□□□ -1.06
ERBB3-215ENST00000550828 NCR3O14931 201 aa8.39□□□□□ -1.07
ERBB3-215ENST00000550828 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
ERBB3-215ENST00000550828 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
ERBB3-215ENST00000550828 HIGD1BQ9P298 99 aa8.39□□□□□ -1.07
ERBB3-215ENST00000550828 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
ERBB3-215ENST00000550828 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
ERBB3-215ENST00000550828 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
ERBB3-215ENST00000550828 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
ERBB3-215ENST00000550828 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
ERBB3-215ENST00000550828 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
ERBB3-215ENST00000550828 Q6ZVH6 145 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 NKAPP1Q8N9T2 125 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
ERBB3-215ENST00000550828 NDUFC2O95298 119 aa8.36□□□□□ -1.07
ERBB3-215ENST00000550828 IFITM1P13164 125 aa8.36□□□□□ -1.07
ERBB3-215ENST00000550828 PPDPFQ9H3Y8 114 aa8.36□□□□□ -1.07
ERBB3-215ENST00000550828 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
ERBB3-215ENST00000550828 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
ERBB3-215ENST00000550828 M0R378 163 aa8.35□□□□□ -1.07
ERBB3-215ENST00000550828 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
ERBB3-215ENST00000550828 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
ERBB3-215ENST00000550828 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
ERBB3-215ENST00000550828 HERC1Q15751 4861 aa8.33□□□□□ -1.08
ERBB3-215ENST00000550828 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
ERBB3-215ENST00000550828 TRBV10-3A0A0K0K1G6 114 aa8.33□□□□□ -1.08
ERBB3-215ENST00000550828 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
ERBB3-215ENST00000550828 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
ERBB3-215ENST00000550828 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
ERBB3-215ENST00000550828 A4D1N5 150 aa8.32□□□□□ -1.08
ERBB3-215ENST00000550828 UBE2BP63146 152 aa8.32□□□□□ -1.08
ERBB3-215ENST00000550828 Q5VSD8 79 aa8.32□□□□□ -1.08
ERBB3-215ENST00000550828 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
ERBB3-215ENST00000550828 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
ERBB3-215ENST00000550828 HNRNPA3P51991 378 aaKnown RBP8.3□□□□□ -1.08
ERBB3-215ENST00000550828 TAL2Q16559 108 aa8.3□□□□□ -1.08
ERBB3-215ENST00000550828 FXYD2P54710 66 aa8.29□□□□□ -1.08
ERBB3-215ENST00000550828 HSD52Q0P140 79 aa8.29□□□□□ -1.08
ERBB3-215ENST00000550828 CEND1Q8N111 149 aa8.29□□□□□ -1.08
ERBB3-215ENST00000550828 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
ERBB3-215ENST00000550828 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
ERBB3-215ENST00000550828 DDTP30046 118 aa8.28□□□□□ -1.08
ERBB3-215ENST00000550828 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
ERBB3-215ENST00000550828 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
ERBB3-215ENST00000550828 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
ERBB3-215ENST00000550828 CFC1BP0CG36 223 aa8.26□□□□□ -1.09
ERBB3-215ENST00000550828 CFC1P0CG37 223 aa8.26□□□□□ -1.09
ERBB3-215ENST00000550828 SPRR1AP35321 89 aa8.26□□□□□ -1.09
ERBB3-215ENST00000550828 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
ERBB3-215ENST00000550828 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
ERBB3-215ENST00000550828 TSTD3H0UI37 97 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 PRYO14603 147 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 BCE1O60756 84 aa8.25□□□□□ -1.09
ERBB3-215ENST00000550828 CTAG1AP78358 180 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms