RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C9orf116Q5BN46 136 aaPredicted RBP8.41□□□□□ -1.06
NUP188-211ENST00000550219 PCP2Q8IVA1 136 aa8.41□□□□□ -1.06
NUP188-211ENST00000550219 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
NUP188-211ENST00000550219 PRR3P79522 188 aaKnown RBP8.4□□□□□ -1.06
NUP188-211ENST00000550219 SPATA45Q537H7 98 aa8.4□□□□□ -1.06
NUP188-211ENST00000550219 PAM16Q9Y3D7 125 aa8.4□□□□□ -1.06
NUP188-211ENST00000550219 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
NUP188-211ENST00000550219 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
NUP188-211ENST00000550219 COX17Q14061 63 aa8.39□□□□□ -1.07
NUP188-211ENST00000550219 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
NUP188-211ENST00000550219 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
NUP188-211ENST00000550219 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
NUP188-211ENST00000550219 LINC00587B1AMM8 73 aa8.38□□□□□ -1.07
NUP188-211ENST00000550219 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
NUP188-211ENST00000550219 COX8AP10176 69 aa8.38□□□□□ -1.07
NUP188-211ENST00000550219 DLEU1O43261 78 aa8.37□□□□□ -1.07
NUP188-211ENST00000550219 Q6ZRP5 223 aa8.37□□□□□ -1.07
NUP188-211ENST00000550219 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
NUP188-211ENST00000550219 TIMM17BO60830 172 aa8.36□□□□□ -1.07
NUP188-211ENST00000550219 S100A12P80511 92 aa8.36□□□□□ -1.07
NUP188-211ENST00000550219 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
NUP188-211ENST00000550219 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 PFN2P35080 140 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 LITAFQ99732 161 aa8.35□□□□□ -1.07
NUP188-211ENST00000550219 LINC00158P58513 81 aa8.34□□□□□ -1.07
NUP188-211ENST00000550219 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
NUP188-211ENST00000550219 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
NUP188-211ENST00000550219 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
NUP188-211ENST00000550219 GAGE2EQ4V326 116 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 SLC25A34Q6PIV7 304 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 SCGB1D4Q6XE38 83 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 LINC01600Q96MT4 127 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 GAGE2DQ9UEU5 116 aa8.32□□□□□ -1.08
NUP188-211ENST00000550219 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
NUP188-211ENST00000550219 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
NUP188-211ENST00000550219 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
NUP188-211ENST00000550219 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
NUP188-211ENST00000550219 C12orf57Q99622 126 aa8.31□□□□□ -1.08
NUP188-211ENST00000550219 TP73-AS1Q9UF72 201 aa8.31□□□□□ -1.08
NUP188-211ENST00000550219 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 SPINK6Q6UWN8 80 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 LINC00518Q8N0U6 118 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 SPANXDQ9BXN6 97 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 XAGE1AQ9HD64 81 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 UBR4Q5T4S7 5183 aa8.3□□□□□ -1.08
NUP188-211ENST00000550219 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
NUP188-211ENST00000550219 Q6ZVH6 145 aa8.29□□□□□ -1.08
NUP188-211ENST00000550219 DAND5Q8N907 189 aa8.29□□□□□ -1.08
NUP188-211ENST00000550219 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
NUP188-211ENST00000550219 HIGD1BQ9P298 99 aa8.29□□□□□ -1.08
NUP188-211ENST00000550219 A0A1W2PNN7 141 aa8.28□□□□□ -1.08
NUP188-211ENST00000550219 C2orf91Q6ZV80 131 aa8.28□□□□□ -1.08
NUP188-211ENST00000550219 PPDPFQ9H3Y8 114 aa8.28□□□□□ -1.08
NUP188-211ENST00000550219 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
NUP188-211ENST00000550219 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
NUP188-211ENST00000550219 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
NUP188-211ENST00000550219 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
NUP188-211ENST00000550219 IFITM1P13164 125 aa8.26□□□□□ -1.09
NUP188-211ENST00000550219 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
NUP188-211ENST00000550219 TNXBP22105 4242 aa8.26□□□□□ -1.09
NUP188-211ENST00000550219 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
NUP188-211ENST00000550219 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
NUP188-211ENST00000550219 Q8NDZ9 215 aa8.25□□□□□ -1.09
NUP188-211ENST00000550219 VPREB1P12018 145 aa8.24□□□□□ -1.09
NUP188-211ENST00000550219 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP188-211ENST00000550219 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
NUP188-211ENST00000550219 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
NUP188-211ENST00000550219 PRO1933Q9H354 126 aa8.24□□□□□ -1.09
NUP188-211ENST00000550219 PSORS1C2Q9UIG4 136 aa8.24□□□□□ -1.09
NUP188-211ENST00000550219 C1orf137Q5JT78 98 aa8.23□□□□□ -1.09
NUP188-211ENST00000550219 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
NUP188-211ENST00000550219 NDUFC2O95298 119 aa8.22□□□□□ -1.09
NUP188-211ENST00000550219 KRTAP10-8P60410 259 aa8.22□□□□□ -1.09
NUP188-211ENST00000550219 NPC2P61916 151 aa8.22□□□□□ -1.09
NUP188-211ENST00000550219 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
NUP188-211ENST00000550219 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
NUP188-211ENST00000550219 TAL2Q16559 108 aa8.21□□□□□ -1.1
NUP188-211ENST00000550219 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
NUP188-211ENST00000550219 HIST1H4GQ99525 98 aa8.21□□□□□ -1.1
NUP188-211ENST00000550219 C22orf24Q9Y442 160 aa8.21□□□□□ -1.1
NUP188-211ENST00000550219 TSTD3H0UI37 97 aa8.2□□□□□ -1.1
NUP188-211ENST00000550219 TRBV10-2A0A0K0K1G8 114 aa8.19□□□□□ -1.1
NUP188-211ENST00000550219 M0QXV9 152 aa8.19□□□□□ -1.1
NUP188-211ENST00000550219 HSD52Q0P140 79 aa8.18□□□□□ -1.1
NUP188-211ENST00000550219 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
NUP188-211ENST00000550219 M0R378 163 aa8.17□□□□□ -1.1
NUP188-211ENST00000550219 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
NUP188-211ENST00000550219 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
NUP188-211ENST00000550219 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
NUP188-211ENST00000550219 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
NUP188-211ENST00000550219 A4D1N5 150 aa8.16□□□□□ -1.1
NUP188-211ENST00000550219 CEND1Q8N111 149 aa8.16□□□□□ -1.1
NUP188-211ENST00000550219 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
NUP188-211ENST00000550219 LRP2P98164 4655 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms