RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CYSRT1A8MQ03 144 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 PDE6GP18545 87 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 LELP1Q5T871 98 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 LAMTOR3Q9UHA4 124 aa6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 APOC4P55056 127 aa6.67□□□□□ -1.34
SMARCD1-205ENST00000548573 DEFB135Q30KP9 77 aa6.67□□□□□ -1.34
SMARCD1-205ENST00000548573 C9orf66Q5T8R8 295 aa6.67□□□□□ -1.34
SMARCD1-205ENST00000548573 ZFYVE26Q68DK2 2539 aa6.67□□□□□ -1.34
SMARCD1-205ENST00000548573 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
SMARCD1-205ENST00000548573 DEFB4AO15263 64 aa6.66□□□□□ -1.34
SMARCD1-205ENST00000548573 MIFP14174 115 aa6.65□□□□□ -1.34
SMARCD1-205ENST00000548573 Q6ZQY7 126 aa6.65□□□□□ -1.34
SMARCD1-205ENST00000548573 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.34
SMARCD1-205ENST00000548573 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.35
SMARCD1-205ENST00000548573 Q8NAQ8 132 aa6.65□□□□□ -1.35
SMARCD1-205ENST00000548573 DIRC1Q969H9 104 aa6.65□□□□□ -1.35
SMARCD1-205ENST00000548573 CXCL6P80162 114 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 Q6ZVQ6 151 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 CELA1Q9UNI1 258 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 M0R2N4 97 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 SPART-AS1P0CW21 52 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
SMARCD1-205ENST00000548573 TRAV7A0A075B6U4 112 aa6.63□□□□□ -1.35
SMARCD1-205ENST00000548573 TRBV7-6A0A0J9YX20 115 aa6.63□□□□□ -1.35
SMARCD1-205ENST00000548573 J3QKU1 62 aa6.63□□□□□ -1.35
SMARCD1-205ENST00000548573 TRBV7-4A0A0J9YYF1 115 aa6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 HAMPP81172 84 aa6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 C20orf197Q8N268 126 aa6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 SPATA3Q8NHX4 192 aa6.62□□□□□ -1.35
SMARCD1-205ENST00000548573 COX7BP24311 80 aa6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 KMT2BQ9UMN6 2715 aaPredicted RBP6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 OXTP01178 125 aa6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 HTN3P15516 51 aa6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
SMARCD1-205ENST00000548573 FN1P02751 2386 aaKnown RBP6.6□□□□□ -1.35
SMARCD1-205ENST00000548573 PDZD2O15018 2839 aa6.6□□□□□ -1.35
SMARCD1-205ENST00000548573 CCDC168Q8NDH2 2452 aa6.6□□□□□ -1.35
SMARCD1-205ENST00000548573 SETD2Q9BYW2 2564 aaPredicted RBP6.6□□□□□ -1.35
SMARCD1-205ENST00000548573 VPREB1P12018 145 aa6.59□□□□□ -1.35
SMARCD1-205ENST00000548573 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
SMARCD1-205ENST00000548573 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 H7BZZ5 65 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 M0R378 163 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 EGFEM1PQ0D2K5 195 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 TRAV10A0A0B4J240 114 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 SMR3AQ99954 134 aa6.57□□□□□ -1.36
SMARCD1-205ENST00000548573 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
SMARCD1-205ENST00000548573 H3BNG1 76 aa6.56□□□□□ -1.36
SMARCD1-205ENST00000548573 KRTAP26-1Q6PEX3 210 aa6.56□□□□□ -1.36
SMARCD1-205ENST00000548573 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
SMARCD1-205ENST00000548573 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
SMARCD1-205ENST00000548573 Q5XG85 94 aa6.55□□□□□ -1.36
SMARCD1-205ENST00000548573 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
SMARCD1-205ENST00000548573 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
SMARCD1-205ENST00000548573 ACANP16112 2415 aa6.54□□□□□ -1.36
SMARCD1-205ENST00000548573 Q6ZRU5 148 aa6.54□□□□□ -1.36
SMARCD1-205ENST00000548573 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
SMARCD1-205ENST00000548573 MTORP42345 2549 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 F8WDY8 70 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 WIPF1O43516 503 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 NDUFC1O43677 76 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
SMARCD1-205ENST00000548573 KPRPQ5T749 579 aaPredicted RBP6.52□□□□□ -1.37
SMARCD1-205ENST00000548573 TENM4Q6N022 2769 aa6.52□□□□□ -1.37
SMARCD1-205ENST00000548573 C4orf26Q17RF5 130 aa6.51□□□□□ -1.37
SMARCD1-205ENST00000548573 SCXQ7RTU7 201 aa6.51□□□□□ -1.37
SMARCD1-205ENST00000548573 RMI2Q96E14 147 aa6.51□□□□□ -1.37
SMARCD1-205ENST00000548573 TM2D3Q9BRN9 247 aa6.51□□□□□ -1.37
SMARCD1-205ENST00000548573 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
SMARCD1-205ENST00000548573 ERC2-IT1O76042 136 aa6.5□□□□□ -1.37
SMARCD1-205ENST00000548573 F8WEM9 126 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 NREPQ16612 68 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 Q6ZRP5 223 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 HIVEP2P31629 2446 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 BPY2O14599 106 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
SMARCD1-205ENST00000548573 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
SMARCD1-205ENST00000548573 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
SMARCD1-205ENST00000548573 VWFP04275 2813 aa6.47□□□□□ -1.37
SMARCD1-205ENST00000548573 INAFM1C9JVW0 142 aa6.47□□□□□ -1.37
SMARCD1-205ENST00000548573 SYCNQ0VAF6 134 aa6.47□□□□□ -1.37
SMARCD1-205ENST00000548573 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
SMARCD1-205ENST00000548573 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.37
SMARCD1-205ENST00000548573 A0A1B0GW54 56 aa6.46□□□□□ -1.37
SMARCD1-205ENST00000548573 ESRGQ1W209 222 aa6.46□□□□□ -1.37
SMARCD1-205ENST00000548573 LINC01556Q5JQF7 62 aa6.46□□□□□ -1.37
SMARCD1-205ENST00000548573 Q6ZTC4 211 aa6.46□□□□□ -1.38
SMARCD1-205ENST00000548573 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.38
SMARCD1-205ENST00000548573 TMEM254Q8TBM7 123 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms