RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 FAM229AH3BQW9 127 aa14.52□□□□□ -0.08
SMARCD1-203ENST00000547247 C7orf33Q8WU49 177 aa14.52□□□□□ -0.08
SMARCD1-203ENST00000547247 PYY3Q5JQD4 70 aa14.51□□□□□ -0.09
SMARCD1-203ENST00000547247 M0QXV9 152 aa14.51□□□□□ -0.09
SMARCD1-203ENST00000547247 SCGB1D4Q6XE38 83 aa14.51□□□□□ -0.09
SMARCD1-203ENST00000547247 PHF5AQ7RTV0 110 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-203ENST00000547247 DAND5Q8N907 189 aa14.51□□□□□ -0.09
SMARCD1-203ENST00000547247 TIMM17BO60830 172 aa14.49□□□□□ -0.09
SMARCD1-203ENST00000547247 C22orf24Q9Y442 160 aa14.49□□□□□ -0.09
SMARCD1-203ENST00000547247 Q5VSD8 79 aa14.48□□□□□ -0.09
SMARCD1-203ENST00000547247 VAMP8Q9BV40 100 aa14.48□□□□□ -0.09
SMARCD1-203ENST00000547247 RPL24P83731 157 aaKnown RBP14.47□□□□□ -0.09
SMARCD1-203ENST00000547247 ADAMTSL4-AS1Q5T5F5 129 aa14.47□□□□□ -0.09
SMARCD1-203ENST00000547247 LITAFQ99732 161 aa14.47□□□□□ -0.09
SMARCD1-203ENST00000547247 TP73-AS1Q9UF72 201 aa14.47□□□□□ -0.09
SMARCD1-203ENST00000547247 PAM16Q9Y3D7 125 aa14.47□□□□□ -0.09
SMARCD1-203ENST00000547247 IGLV5-37A0A075B6J1 123 aa14.46□□□□□ -0.09
SMARCD1-203ENST00000547247 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
SMARCD1-203ENST00000547247 LOC107984156A0A0G2JMH3 177 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 VPREB1P12018 145 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 SPATA45Q537H7 98 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 ARL17AQ8IVW1 177 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 BOD1L2Q8IYS8 172 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 MIEN1Q9BRT3 115 aa14.45□□□□□ -0.1
SMARCD1-203ENST00000547247 PLA2G1BP04054 148 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-203ENST00000547247 RPL37AP61513 92 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-203ENST00000547247 LBHQ53QV2 105 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-203ENST00000547247 MRPL55Q7Z7F7 128 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-203ENST00000547247 TMEM238C9JI98 176 aa14.43□□□□□ -0.1
SMARCD1-203ENST00000547247 Q8NDZ9 215 aa14.43□□□□□ -0.1
SMARCD1-203ENST00000547247 COX8AP10176 69 aa14.42□□□□□ -0.1
SMARCD1-203ENST00000547247 UBE2BP63146 152 aa14.42□□□□□ -0.1
SMARCD1-203ENST00000547247 PCLOQ9Y6V0 5065 aa14.41□□□□□ -0.1
SMARCD1-203ENST00000547247 NPC2P61916 151 aa14.41□□□□□ -0.1
SMARCD1-203ENST00000547247 ABCA13Q86UQ4 5058 aa14.4□□□□□ -0.1
SMARCD1-203ENST00000547247 VPS13BQ7Z7G8 4022 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 SOSTDC1Q6X4U4 206 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 LINC00167Q96N53 147 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 SPANXDQ9BXN6 97 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 SPANXCQ9NY87 97 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 LINC00308Q8TCZ7 52 aa14.39□□□□□ -0.11
SMARCD1-203ENST00000547247 C14orf144Q96I85 54 aa14.38□□□□□ -0.11
SMARCD1-203ENST00000547247 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
SMARCD1-203ENST00000547247 DLEU1O43261 78 aa14.37□□□□□ -0.11
SMARCD1-203ENST00000547247 EIF4EBP3O60516 100 aaPredicted RBP14.37□□□□□ -0.11
SMARCD1-203ENST00000547247 Q6ZVH6 145 aa14.37□□□□□ -0.11
SMARCD1-203ENST00000547247 KRTAP11-1Q8IUC1 163 aa14.36□□□□□ -0.11
SMARCD1-203ENST00000547247 PSORS1C2Q9UIG4 136 aa14.36□□□□□ -0.11
SMARCD1-203ENST00000547247 M0R378 163 aa14.35□□□□□ -0.11
SMARCD1-203ENST00000547247 KRTAP10-4P60372 401 aaPredicted RBP14.35□□□□□ -0.11
SMARCD1-203ENST00000547247 PRR3P79522 188 aaKnown RBP14.35□□□□□ -0.11
SMARCD1-203ENST00000547247 RPL37AP8A6NKH3 93 aa14.34□□□□□ -0.11
SMARCD1-203ENST00000547247 NDUFC2O95298 119 aa14.34□□□□□ -0.11
SMARCD1-203ENST00000547247 NCR3O14931 201 aa14.33□□□□□ -0.12
SMARCD1-203ENST00000547247 IFITM1P13164 125 aa14.33□□□□□ -0.12
SMARCD1-203ENST00000547247 S100A12P80511 92 aa14.33□□□□□ -0.12
SMARCD1-203ENST00000547247 SLC25A34Q6PIV7 304 aa14.33□□□□□ -0.12
SMARCD1-203ENST00000547247 COPS9Q8WXC6 57 aa14.33□□□□□ -0.12
SMARCD1-203ENST00000547247 SPANXB1Q9NS25 103 aaPredicted RBP14.32□□□□□ -0.12
SMARCD1-203ENST00000547247 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMARCD1-203ENST00000547247 IGLV1-50A0A075B6I6 118 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 IGKV2-28A0A075B6P5 120 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 IGKV2D-28P01615 120 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 C1orf137Q5JT78 98 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 SRRM2Q9UQ35 2752 aaKnown RBP14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 TRBV10-2A0A0K0K1G8 114 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 PPDPFQ9H3Y8 114 aa14.3□□□□□ -0.12
SMARCD1-203ENST00000547247 LOC105371267A0A1B0GV96 52 aa14.29□□□□□ -0.12
SMARCD1-203ENST00000547247 MUSTN1Q8IVN3 82 aa14.29□□□□□ -0.12
SMARCD1-203ENST00000547247 SMIM6P0DI80 62 aa14.26□□□□□ -0.13
SMARCD1-203ENST00000547247 INAFM2P0DMQ5 153 aa14.25□□□□□ -0.13
SMARCD1-203ENST00000547247 HIGD1BQ9P298 99 aa14.25□□□□□ -0.13
SMARCD1-203ENST00000547247 TRBV10-3A0A0K0K1G6 114 aa14.24□□□□□ -0.13
SMARCD1-203ENST00000547247 HIST1H4GQ99525 98 aa14.24□□□□□ -0.13
SMARCD1-203ENST00000547247 S100A7L2Q5SY68 101 aa14.23□□□□□ -0.13
SMARCD1-203ENST00000547247 LINC00518Q8N0U6 118 aa14.23□□□□□ -0.13
SMARCD1-203ENST00000547247 IGLV7-43P04211 117 aa14.22□□□□□ -0.13
SMARCD1-203ENST00000547247 DDTP30046 118 aa14.22□□□□□ -0.13
SMARCD1-203ENST00000547247 HNRNPA3P51991 378 aaKnown RBP14.22□□□□□ -0.13
SMARCD1-203ENST00000547247 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
SMARCD1-203ENST00000547247 C2orf91Q6ZV80 131 aa14.22□□□□□ -0.13
SMARCD1-203ENST00000547247 BCE1O60756 84 aa14.21□□□□□ -0.14
SMARCD1-203ENST00000547247 TMEM126AQ9H061 195 aa14.21□□□□□ -0.14
SMARCD1-203ENST00000547247 IGLV6-57P01721 117 aa14.19□□□□□ -0.14
SMARCD1-203ENST00000547247 KCNQ1DNQ9H478 68 aa14.19□□□□□ -0.14
SMARCD1-203ENST00000547247 PRYO14603 147 aa14.18□□□□□ -0.14
SMARCD1-203ENST00000547247 OR13C6PQ8NH95 151 aa14.17□□□□□ -0.14
SMARCD1-203ENST00000547247 UQCR10Q9UDW1 63 aa14.17□□□□□ -0.14
SMARCD1-203ENST00000547247 SPINK6Q6UWN8 80 aa14.16□□□□□ -0.14
SMARCD1-203ENST00000547247 LINC00337Q8N6G1 96 aa14.16□□□□□ -0.14
SMARCD1-203ENST00000547247 A4D1N5 150 aa14.15□□□□□ -0.14
SMARCD1-203ENST00000547247 CBY1Q9Y3M2 126 aa14.14□□□□□ -0.15
SMARCD1-203ENST00000547247 ZNF861PO60384 105 aa14.13□□□□□ -0.15
SMARCD1-203ENST00000547247 TAL2Q16559 108 aa14.13□□□□□ -0.15
SMARCD1-203ENST00000547247 RPL28P46779 137 aaKnown RBP14.13□□□□□ -0.15
SMARCD1-203ENST00000547247 UBE2AP49459 152 aa14.13□□□□□ -0.15
SMARCD1-203ENST00000547247 FAM19A1Q7Z5A9 133 aa14.13□□□□□ -0.15
SMARCD1-203ENST00000547247 TRAV23DV6A0A075B6W5 121 aa14.12□□□□□ -0.15
SMARCD1-203ENST00000547247 SPRR1AP35321 89 aa14.12□□□□□ -0.15
SMARCD1-203ENST00000547247 PKHD1L1Q86WI1 4243 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms