RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 FAM19A5Q7Z5A7 132 aaPredicted RBP4.9□□□□□ -1.63
RFX4-207ENST00000546882 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
RFX4-207ENST00000546882 TOMM6Q96B49 74 aa4.9□□□□□ -1.63
RFX4-207ENST00000546882 IFI27L1Q96BM0 104 aa4.9□□□□□ -1.63
RFX4-207ENST00000546882 TSTD3H0UI37 97 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 ZNF25P17030 456 aaPredicted RBP4.89□□□□□ -1.63
RFX4-207ENST00000546882 C10orf25Q5T742 122 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 LINC01545Q5VT33 79 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 TEX43Q6ZNM6 134 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 RPL39LQ96EH5 51 aaKnown RBP4.89□□□□□ -1.63
RFX4-207ENST00000546882 TMEM141Q96I45 108 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 PPDPFQ9H3Y8 114 aa4.89□□□□□ -1.63
RFX4-207ENST00000546882 A0A096LNJ9 63 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 TRAV12-1A0A0B4J245 112 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 HSBP1L1C9JCN9 74 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 PLNP26678 52 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 MT1HP80294 61 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 SS18Q15532 418 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 C2orf66Q6UXQ4 117 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 Q6ZN92 141 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
RFX4-207ENST00000546882 M0QXV9 152 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 UBE2BP63146 152 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 SCGB3A1Q96QR1 104 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 CDC42SE2Q9NRR3 84 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
RFX4-207ENST00000546882 PYGO1Q9Y3Y4 419 aa4.87□□□□□ -1.63
RFX4-207ENST00000546882 COX7A2LO14548 114 aa4.86□□□□□ -1.63
RFX4-207ENST00000546882 TSHBP01222 138 aa4.86□□□□□ -1.63
RFX4-207ENST00000546882 TLX1NBP0CAT3 122 aa4.86□□□□□ -1.63
RFX4-207ENST00000546882 ANAPC11Q9NYG5 84 aa4.86□□□□□ -1.63
RFX4-207ENST00000546882 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
RFX4-207ENST00000546882 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
RFX4-207ENST00000546882 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
RFX4-207ENST00000546882 LINC00304Q8N9R0 145 aa4.85□□□□□ -1.63
RFX4-207ENST00000546882 TMEM101Q96IK0 257 aa4.85□□□□□ -1.63
RFX4-207ENST00000546882 USH2AO75445 5202 aa4.85□□□□□ -1.63
RFX4-207ENST00000546882 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 F8VRH5 84 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 DPM2O94777 84 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 MRPS36P82909 103 aaKnown RBP4.84□□□□□ -1.63
RFX4-207ENST00000546882 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 PMVKQ15126 192 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 GAGE2EQ4V326 116 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 C5orf38Q86SI9 138 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 MRPL52Q86TS9 123 aaKnown RBP4.84□□□□□ -1.63
RFX4-207ENST00000546882 GAGE2DQ9UEU5 116 aa4.84□□□□□ -1.63
RFX4-207ENST00000546882 SEC11AP67812 179 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 CTAG1AP78358 180 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 PMCHL2Q9BQD1 86 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 C2orf88Q9BSF0 95 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 C6orf48Q9UBA6 75 aa4.83□□□□□ -1.64
RFX4-207ENST00000546882 IGKCP01834 107 aa4.82□□□□□ -1.64
RFX4-207ENST00000546882 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
RFX4-207ENST00000546882 VCX2Q9H322 139 aa4.82□□□□□ -1.64
RFX4-207ENST00000546882 CST9LQ9H4G1 147 aa4.82□□□□□ -1.64
RFX4-207ENST00000546882 CHTOPQ9Y3Y2 248 aaKnown RBP4.82□□□□□ -1.64
RFX4-207ENST00000546882 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
RFX4-207ENST00000546882 F8WDY8 70 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 H0Y8G0 127 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
RFX4-207ENST00000546882 HERVK_113P61574 105 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 SPATA45Q537H7 98 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 MIEN1Q9BRT3 115 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 PAM16Q9Y3D7 125 aa4.81□□□□□ -1.64
RFX4-207ENST00000546882 IGLV4-3A0A075B6K6 122 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 PRYO14603 147 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 NDUFA1O15239 70 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 DLEU1O43261 78 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 DDTP30046 118 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
RFX4-207ENST00000546882 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
RFX4-207ENST00000546882 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 AMELXQ99217 191 aa4.8□□□□□ -1.64
RFX4-207ENST00000546882 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
RFX4-207ENST00000546882 C11orf86A6NJI1 115 aa4.79□□□□□ -1.64
RFX4-207ENST00000546882 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
RFX4-207ENST00000546882 RNASE13Q5GAN3 156 aaKnown RBP4.79□□□□□ -1.64
RFX4-207ENST00000546882 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
RFX4-207ENST00000546882 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
RFX4-207ENST00000546882 ORAOV1Q8WV07 137 aa4.79□□□□□ -1.64
RFX4-207ENST00000546882 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 H3BRM9 83 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 BCE1O60756 84 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 COX8AP10176 69 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 HERVK_113P63121 156 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 LBHQ53QV2 105 aaPredicted RBP4.78□□□□□ -1.64
RFX4-207ENST00000546882 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 BOD1L2Q8IYS8 172 aa4.78□□□□□ -1.64
RFX4-207ENST00000546882 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms