RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 HIGD1CA8MV81 97 aa4.44□□□□□ -1.7
CD4-211ENST00000543755 CKS2P33552 79 aa4.44□□□□□ -1.7
CD4-211ENST00000543755 TAGLN2P37802 199 aaKnown RBP4.44□□□□□ -1.7
CD4-211ENST00000543755 RIGQ13278 110 aa4.44□□□□□ -1.7
CD4-211ENST00000543755 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
CD4-211ENST00000543755 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
CD4-211ENST00000543755 PRYO14603 147 aa4.42□□□□□ -1.7
CD4-211ENST00000543755 S100A12P80511 92 aa4.42□□□□□ -1.7
CD4-211ENST00000543755 MRPL51Q4U2R6 128 aaKnown RBP4.42□□□□□ -1.7
CD4-211ENST00000543755 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
CD4-211ENST00000543755 ZC2HC1BQ5TFG8 222 aa4.42□□□□□ -1.7
CD4-211ENST00000543755 RGS21Q2M5E4 152 aa4.41□□□□□ -1.7
CD4-211ENST00000543755 FAM104BQ5XKR9 115 aa4.41□□□□□ -1.7
CD4-211ENST00000543755 C2orf66Q6UXQ4 117 aa4.41□□□□□ -1.7
CD4-211ENST00000543755 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
CD4-211ENST00000543755 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 TMEM250H0YL14 139 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 C6orf99Q4VX62 202 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 AMELXQ99217 191 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 BATF3Q9NR55 127 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 CYSLTR1Q9Y271 337 aa4.4□□□□□ -1.71
CD4-211ENST00000543755 TRAV9-1A0A075B6T8 112 aa4.39□□□□□ -1.71
CD4-211ENST00000543755 FAM236DA0A1B0GTK5 79 aa4.39□□□□□ -1.71
CD4-211ENST00000543755 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
CD4-211ENST00000543755 FAM236CP0DP71 79 aa4.39□□□□□ -1.71
CD4-211ENST00000543755 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
CD4-211ENST00000543755 COX17Q14061 63 aa4.38□□□□□ -1.71
CD4-211ENST00000543755 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
CD4-211ENST00000543755 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
CD4-211ENST00000543755 D6R8Y8 96 aa4.37□□□□□ -1.71
CD4-211ENST00000543755 SPRR1AP35321 89 aa4.37□□□□□ -1.71
CD4-211ENST00000543755 CEBPGP53567 150 aa4.37□□□□□ -1.71
CD4-211ENST00000543755 OSTCQ9NRP0 149 aa4.37□□□□□ -1.71
CD4-211ENST00000543755 ERG28Q9UKR5 140 aa4.37□□□□□ -1.71
CD4-211ENST00000543755 ERC2-IT1O76042 136 aa4.36□□□□□ -1.71
CD4-211ENST00000543755 NPYP01303 97 aa4.36□□□□□ -1.71
CD4-211ENST00000543755 SLC51BQ86UW2 128 aa4.36□□□□□ -1.71
CD4-211ENST00000543755 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
CD4-211ENST00000543755 CHTOPQ9Y3Y2 248 aaKnown RBP4.36□□□□□ -1.71
CD4-211ENST00000543755 PPBPP02775 128 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 C10orf91Q5T1B1 145 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 Q8NDZ9 215 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 SMIM7Q9BQ49 75 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 NAT8BQ9UHF3 227 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 V9GYV3 84 aa4.35□□□□□ -1.71
CD4-211ENST00000543755 F8W036 122 aa4.34□□□□□ -1.71
CD4-211ENST00000543755 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
CD4-211ENST00000543755 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
CD4-211ENST00000543755 PET117Q6UWS5 81 aa4.34□□□□□ -1.71
CD4-211ENST00000543755 TINCRA0A1B0GVN0 87 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 A0A1B0GW15 77 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 B5MCH6 92 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 H3BRM9 83 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 H7C2G1 150 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
CD4-211ENST00000543755 S100A8P05109 93 aa4.32□□□□□ -1.72
CD4-211ENST00000543755 CD164Q04900 197 aa4.32□□□□□ -1.72
CD4-211ENST00000543755 JOSD1Q15040 202 aaPredicted RBP4.32□□□□□ -1.72
CD4-211ENST00000543755 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
CD4-211ENST00000543755 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
CD4-211ENST00000543755 ORMDL3Q8N138 153 aa4.32□□□□□ -1.72
CD4-211ENST00000543755 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
CD4-211ENST00000543755 MRPL18Q9H0U6 180 aaKnown RBP4.32□□□□□ -1.72
CD4-211ENST00000543755 SMIM27A0A1W2PRY6 76 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 A4D1N5 150 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 IGIPA6NJ69 53 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 NCR3O14931 201 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 G0S2P27469 103 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 LINC00158P58513 81 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 Q75L30 129 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 Q9BRP9 147 aa4.31□□□□□ -1.72
CD4-211ENST00000543755 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 Q5XG85 94 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 SFTA2Q6UW10 78 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 ALKAL2Q6UX46 152 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 Q6ZRX8 168 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 TCTE3Q8IZS6 198 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 PRELID3AQ96N28 172 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 MAP1LC3AQ9H492 121 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 LAMTOR3Q9UHA4 124 aa4.3□□□□□ -1.72
CD4-211ENST00000543755 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
CD4-211ENST00000543755 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
CD4-211ENST00000543755 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
CD4-211ENST00000543755 Q6ZVH6 145 aa4.29□□□□□ -1.72
CD4-211ENST00000543755 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
CD4-211ENST00000543755 BOD1L2Q8IYS8 172 aa4.29□□□□□ -1.72
CD4-211ENST00000543755 PMVKQ15126 192 aa4.28□□□□□ -1.72
CD4-211ENST00000543755 ADIRFQ15847 76 aa4.28□□□□□ -1.72
CD4-211ENST00000543755 MRPL54Q6P161 138 aaKnown RBP4.28□□□□□ -1.72
CD4-211ENST00000543755 PCP2Q8IVA1 136 aa4.28□□□□□ -1.72
CD4-211ENST00000543755 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
CD4-211ENST00000543755 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
CD4-211ENST00000543755 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
CD4-211ENST00000543755 C5orf52A6NGY3 159 aa4.27□□□□□ -1.73
CD4-211ENST00000543755 A6NN06 94 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms