RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
LINC01089-209ENST00000542933 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
LINC01089-209ENST00000542933 ERG28Q9UKR5 140 aa9.65□□□□□ -0.86
LINC01089-209ENST00000542933 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
LINC01089-209ENST00000542933 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
LINC01089-209ENST00000542933 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
LINC01089-209ENST00000542933 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
LINC01089-209ENST00000542933 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
LINC01089-209ENST00000542933 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
LINC01089-209ENST00000542933 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
LINC01089-209ENST00000542933 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
LINC01089-209ENST00000542933 LINC00158P58513 81 aa9.62□□□□□ -0.87
LINC01089-209ENST00000542933 COX17Q14061 63 aa9.62□□□□□ -0.87
LINC01089-209ENST00000542933 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
LINC01089-209ENST00000542933 M0QXV9 152 aa9.61□□□□□ -0.87
LINC01089-209ENST00000542933 SMIM6P0DI80 62 aa9.61□□□□□ -0.87
LINC01089-209ENST00000542933 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
LINC01089-209ENST00000542933 S100A12P80511 92 aa9.61□□□□□ -0.87
LINC01089-209ENST00000542933 HNRNPA3P51991 378 aaKnown RBP9.6□□□□□ -0.87
LINC01089-209ENST00000542933 SCGB1D4Q6XE38 83 aa9.6□□□□□ -0.87
LINC01089-209ENST00000542933 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
LINC01089-209ENST00000542933 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
LINC01089-209ENST00000542933 COX8AP10176 69 aa9.59□□□□□ -0.87
LINC01089-209ENST00000542933 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
LINC01089-209ENST00000542933 C14orf144Q96I85 54 aa9.58□□□□□ -0.88
LINC01089-209ENST00000542933 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
LINC01089-209ENST00000542933 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
LINC01089-209ENST00000542933 PLA2G2DQ9UNK4 145 aa9.57□□□□□ -0.88
LINC01089-209ENST00000542933 TIMM17BO60830 172 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 DAND5Q8N907 189 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 TP73-AS1Q9UF72 201 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
LINC01089-209ENST00000542933 LRP1Q07954 4544 aaKnown RBP9.55□□□□□ -0.88
LINC01089-209ENST00000542933 UBE2BP63146 152 aa9.55□□□□□ -0.88
LINC01089-209ENST00000542933 C22orf24Q9Y442 160 aa9.55□□□□□ -0.88
LINC01089-209ENST00000542933 TMEM238C9JI98 176 aa9.54□□□□□ -0.88
LINC01089-209ENST00000542933 DLEU1O43261 78 aa9.54□□□□□ -0.88
LINC01089-209ENST00000542933 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
LINC01089-209ENST00000542933 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
LINC01089-209ENST00000542933 LITAFQ99732 161 aa9.54□□□□□ -0.88
LINC01089-209ENST00000542933 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
LINC01089-209ENST00000542933 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
LINC01089-209ENST00000542933 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
LINC01089-209ENST00000542933 IGLV5-37A0A075B6J1 123 aa9.52□□□□□ -0.89
LINC01089-209ENST00000542933 KRTAP29-1A8MX34 341 aaPredicted RBP9.52□□□□□ -0.89
LINC01089-209ENST00000542933 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.89
LINC01089-209ENST00000542933 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
LINC01089-209ENST00000542933 OXTP01178 125 aa9.51□□□□□ -0.89
LINC01089-209ENST00000542933 NPC2P61916 151 aa9.51□□□□□ -0.89
LINC01089-209ENST00000542933 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
LINC01089-209ENST00000542933 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
LINC01089-209ENST00000542933 C12orf57Q99622 126 aa9.51□□□□□ -0.89
LINC01089-209ENST00000542933 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
LINC01089-209ENST00000542933 SPANXCQ9NY87 97 aa9.5□□□□□ -0.89
LINC01089-209ENST00000542933 VPREB1P12018 145 aa9.49□□□□□ -0.89
LINC01089-209ENST00000542933 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
LINC01089-209ENST00000542933 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC01089-209ENST00000542933 HERC1Q15751 4861 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 J3QL48 77 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 Q6ZVH6 145 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 PRO1933Q9H354 126 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
LINC01089-209ENST00000542933 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
LINC01089-209ENST00000542933 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
LINC01089-209ENST00000542933 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
LINC01089-209ENST00000542933 IFITM1P13164 125 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 C2orf91Q6ZV80 131 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 LINC00518Q8N0U6 118 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 COPS9Q8WXC6 57 aa9.46□□□□□ -0.9
LINC01089-209ENST00000542933 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
LINC01089-209ENST00000542933 Q8NDZ9 215 aa9.45□□□□□ -0.9
LINC01089-209ENST00000542933 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
LINC01089-209ENST00000542933 RPL37AP8A6NKH3 93 aa9.44□□□□□ -0.9
LINC01089-209ENST00000542933 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
LINC01089-209ENST00000542933 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
LINC01089-209ENST00000542933 NCR3O14931 201 aa9.43□□□□□ -0.9
LINC01089-209ENST00000542933 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
LINC01089-209ENST00000542933 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
LINC01089-209ENST00000542933 NDUFC2O95298 119 aa9.42□□□□□ -0.9
LINC01089-209ENST00000542933 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
LINC01089-209ENST00000542933 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
LINC01089-209ENST00000542933 BCE1O60756 84 aa9.41□□□□□ -0.9
LINC01089-209ENST00000542933 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
LINC01089-209ENST00000542933 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
LINC01089-209ENST00000542933 H0Y9J4 135 aa9.4□□□□□ -0.9
LINC01089-209ENST00000542933 M0R378 163 aa9.4□□□□□ -0.9
LINC01089-209ENST00000542933 ZNF861PO60384 105 aa9.39□□□□□ -0.91
LINC01089-209ENST00000542933 TAL2Q16559 108 aa9.39□□□□□ -0.91
LINC01089-209ENST00000542933 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
LINC01089-209ENST00000542933 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
LINC01089-209ENST00000542933 HSD52Q0P140 79 aa9.38□□□□□ -0.91
LINC01089-209ENST00000542933 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms