RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 Q6ZRU5 148 aa9.36□□□□□ -0.91
LDB3-207ENST00000542786 UPK3BQ9BT76 320 aa9.36□□□□□ -0.91
LDB3-207ENST00000542786 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
LDB3-207ENST00000542786 F8WDY8 70 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 NCR3O14931 201 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
LDB3-207ENST00000542786 STAB2Q8WWQ8 2551 aa9.34□□□□□ -0.91
LDB3-207ENST00000542786 Q9HAA7 133 aa9.34□□□□□ -0.91
LDB3-207ENST00000542786 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
LDB3-207ENST00000542786 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
LDB3-207ENST00000542786 B9D2Q9BPU9 175 aa9.33□□□□□ -0.92
LDB3-207ENST00000542786 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
LDB3-207ENST00000542786 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
LDB3-207ENST00000542786 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
LDB3-207ENST00000542786 LECT2O14960 151 aa9.31□□□□□ -0.92
LDB3-207ENST00000542786 PCP4P48539 62 aa9.31□□□□□ -0.92
LDB3-207ENST00000542786 CASC10Q5T4H9 136 aa9.31□□□□□ -0.92
LDB3-207ENST00000542786 VPREB1P12018 145 aa9.3□□□□□ -0.92
LDB3-207ENST00000542786 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
LDB3-207ENST00000542786 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
LDB3-207ENST00000542786 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
LDB3-207ENST00000542786 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
LDB3-207ENST00000542786 A0A1B0GX51 115 aa9.29□□□□□ -0.92
LDB3-207ENST00000542786 XGP55808 180 aa9.29□□□□□ -0.92
LDB3-207ENST00000542786 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
LDB3-207ENST00000542786 SLPIP03973 132 aa9.28□□□□□ -0.92
LDB3-207ENST00000542786 C6orf99Q4VX62 202 aa9.28□□□□□ -0.92
LDB3-207ENST00000542786 FAM240AA0A1B0GVK7 77 aa9.28□□□□□ -0.92
LDB3-207ENST00000542786 S100A7L2Q5SY68 101 aa9.28□□□□□ -0.92
LDB3-207ENST00000542786 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
LDB3-207ENST00000542786 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
LDB3-207ENST00000542786 Q6ZRP5 223 aa9.27□□□□□ -0.93
LDB3-207ENST00000542786 APLNQ9ULZ1 77 aa9.27□□□□□ -0.93
LDB3-207ENST00000542786 USP17L23D6RBM5 183 aa9.26□□□□□ -0.93
LDB3-207ENST00000542786 DNAL4O96015 105 aa9.26□□□□□ -0.93
LDB3-207ENST00000542786 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
LDB3-207ENST00000542786 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
LDB3-207ENST00000542786 Q8N814 137 aa9.26□□□□□ -0.93
LDB3-207ENST00000542786 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
LDB3-207ENST00000542786 DNHD1Q96M86 4753 aa9.25□□□□□ -0.93
LDB3-207ENST00000542786 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
LDB3-207ENST00000542786 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
LDB3-207ENST00000542786 RMI2Q96E14 147 aa9.25□□□□□ -0.93
LDB3-207ENST00000542786 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
LDB3-207ENST00000542786 M0R378 163 aa9.23□□□□□ -0.93
LDB3-207ENST00000542786 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
LDB3-207ENST00000542786 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
LDB3-207ENST00000542786 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
LDB3-207ENST00000542786 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
LDB3-207ENST00000542786 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.93
LDB3-207ENST00000542786 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.93
LDB3-207ENST00000542786 INAFM2P0DMQ5 153 aa9.2□□□□□ -0.94
LDB3-207ENST00000542786 SDIM1Q6ZPB5 146 aa9.19□□□□□ -0.94
LDB3-207ENST00000542786 PLA2G2DQ9UNK4 145 aa9.19□□□□□ -0.94
LDB3-207ENST00000542786 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
LDB3-207ENST00000542786 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
LDB3-207ENST00000542786 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
LDB3-207ENST00000542786 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
LDB3-207ENST00000542786 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
LDB3-207ENST00000542786 ACYP1P07311 99 aa9.18□□□□□ -0.94
LDB3-207ENST00000542786 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
LDB3-207ENST00000542786 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
LDB3-207ENST00000542786 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
LDB3-207ENST00000542786 KRTAP7-1Q8IUC3 87 aa9.16□□□□□ -0.94
LDB3-207ENST00000542786 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
LDB3-207ENST00000542786 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
LDB3-207ENST00000542786 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.95
LDB3-207ENST00000542786 COX7BP24311 80 aa9.15□□□□□ -0.95
LDB3-207ENST00000542786 C7orf33Q8WU49 177 aa9.15□□□□□ -0.95
LDB3-207ENST00000542786 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
LDB3-207ENST00000542786 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
LDB3-207ENST00000542786 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
LDB3-207ENST00000542786 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
LDB3-207ENST00000542786 TTC32Q5I0X7 151 aa9.13□□□□□ -0.95
LDB3-207ENST00000542786 FAM168BA1KXE4 195 aa9.12□□□□□ -0.95
LDB3-207ENST00000542786 SNCGO76070 127 aa9.12□□□□□ -0.95
LDB3-207ENST00000542786 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
LDB3-207ENST00000542786 Q6ZQY7 126 aa9.11□□□□□ -0.95
LDB3-207ENST00000542786 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
LDB3-207ENST00000542786 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
LDB3-207ENST00000542786 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
LDB3-207ENST00000542786 JMJD7-PLA2G4BH0Y9G9 81 aa9.1□□□□□ -0.95
LDB3-207ENST00000542786 Q6Q795 121 aa9.1□□□□□ -0.95
LDB3-207ENST00000542786 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
LDB3-207ENST00000542786 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
LDB3-207ENST00000542786 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
LDB3-207ENST00000542786 PRKDCP78527 4128 aaKnown RBP9.09□□□□□ -0.95
LDB3-207ENST00000542786 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
LDB3-207ENST00000542786 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
LDB3-207ENST00000542786 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
LDB3-207ENST00000542786 A0A1B0GV72 72 aa9.08□□□□□ -0.96
LDB3-207ENST00000542786 CCKP06307 115 aa9.08□□□□□ -0.96
LDB3-207ENST00000542786 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
LDB3-207ENST00000542786 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
LDB3-207ENST00000542786 H3BQ85 93 aa9.07□□□□□ -0.96
LDB3-207ENST00000542786 SPRR1AP35321 89 aa9.07□□□□□ -0.96
LDB3-207ENST00000542786 Q6ZRN7 208 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms