RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SPAG11BQ08648 103 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 LINC00167Q96N53 147 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 ANAPC13Q9BS18 74 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 ATRQ13535 2644 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 LECT2O14960 151 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 NDUFV3P56181 108 aaKnown RBP4.44□□□□□ -1.7
PTPRO-208ENST00000542557 CD164Q04900 197 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 GVQW2A0A096LPI5 108 aaPredicted RBP4.43□□□□□ -1.7
PTPRO-208ENST00000542557 LYPD5Q6UWN5 251 aa4.43□□□□□ -1.7
PTPRO-208ENST00000542557 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
PTPRO-208ENST00000542557 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
PTPRO-208ENST00000542557 EGFEM1PQ0D2K5 195 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 ENHOQ6UWT2 76 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 KLK12Q9UKR0 248 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 NHLRC4P0CG21 123 aaPredicted RBP4.42□□□□□ -1.7
PTPRO-208ENST00000542557 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
PTPRO-208ENST00000542557 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 CYSRT1A8MQ03 144 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
PTPRO-208ENST00000542557 C10orf25Q5T742 122 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 KRTAP10-11P60412 298 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 PRR3P79522 188 aaKnown RBP4.41□□□□□ -1.7
PTPRO-208ENST00000542557 KPRPQ5T749 579 aaPredicted RBP4.41□□□□□ -1.7
PTPRO-208ENST00000542557 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 Q8N814 137 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 Q8NDZ9 215 aa4.41□□□□□ -1.7
PTPRO-208ENST00000542557 C4orf26Q17RF5 130 aa4.4□□□□□ -1.7
PTPRO-208ENST00000542557 C9orf129Q5T035 196 aaKnown RBP4.4□□□□□ -1.7
PTPRO-208ENST00000542557 NCR3O14931 201 aa4.4□□□□□ -1.71
PTPRO-208ENST00000542557 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
PTPRO-208ENST00000542557 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 C6orf99Q4VX62 202 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 SLPIP03973 132 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 KRTAP26-1Q6PEX3 210 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 Q6ZTC4 211 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 WFDC10BQ8IUB3 73 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
PTPRO-208ENST00000542557 LINC00575Q6W349 94 aa4.38□□□□□ -1.71
PTPRO-208ENST00000542557 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
PTPRO-208ENST00000542557 CMYA5Q8N3K9 4069 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 CCKP06307 115 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 H3BQ85 93 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 RPL18AQ02543 176 aaKnown RBP4.37□□□□□ -1.71
PTPRO-208ENST00000542557 LINC01556Q5JQF7 62 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 Q6JHZ5 121 aa4.37□□□□□ -1.71
PTPRO-208ENST00000542557 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 hADV29S1A0JD25 119 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 ESRGQ1W209 222 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 CAMK2N2Q96S95 79 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
PTPRO-208ENST00000542557 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 DEFB131BA0A096LNP1 70 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
PTPRO-208ENST00000542557 Q75L30 129 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 C3orf56Q8N813 242 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 TRBV10-3A0A0K0K1G6 114 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 C11orf45Q8TAV5 145 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 DIRC1Q969H9 104 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 F8P00451 2351 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
PTPRO-208ENST00000542557 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 ANK2Q01484 3957 aa4.35□□□□□ -1.71
PTPRO-208ENST00000542557 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
PTPRO-208ENST00000542557 Q6ZRU5 148 aa4.34□□□□□ -1.71
PTPRO-208ENST00000542557 XAGE1AQ9HD64 81 aa4.34□□□□□ -1.71
PTPRO-208ENST00000542557 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.72
PTPRO-208ENST00000542557 C1orf195Q5TG92 126 aa4.34□□□□□ -1.72
PTPRO-208ENST00000542557 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.72
PTPRO-208ENST00000542557 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
PTPRO-208ENST00000542557 M0R378 163 aa4.33□□□□□ -1.72
PTPRO-208ENST00000542557 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
PTPRO-208ENST00000542557 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
PTPRO-208ENST00000542557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
PTPRO-208ENST00000542557 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
PTPRO-208ENST00000542557 Q6ZQY7 126 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 TRAV10A0A0B4J240 114 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 ATOX1O00244 68 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 COX7BP24311 80 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
PTPRO-208ENST00000542557 Q6ZQT0 140 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 PDE6GP18545 87 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 TENM3Q9P273 2699 aa4.32□□□□□ -1.72
PTPRO-208ENST00000542557 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
PTPRO-208ENST00000542557 UQCRQO14949 82 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms