RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 C9orf163Q8N9P6 203 aa2.84□□□□□ -1.95
MDM2-228ENST00000542502 CHTOPQ9Y3Y2 248 aaKnown RBP2.84□□□□□ -1.95
MDM2-228ENST00000542502 FRAS1Q86XX4 4008 aa2.84□□□□□ -1.96
MDM2-228ENST00000542502 HECTD4Q9Y4D8 3996 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 A0A096LNJ9 63 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 TRBV30A0A0K0K1B3 111 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 DPM2O94777 84 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 HERVK_113P61574 105 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 SYCNQ0VAF6 134 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
MDM2-228ENST00000542502 LINC00173Q6ZV60 143 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 Q8IZM0 81 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 FAM19A2Q8N3H0 131 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 ORAOV1Q8WV07 137 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 CHAC1Q9BUX1 264 aa2.83□□□□□ -1.96
MDM2-228ENST00000542502 MRPL35Q9NZE8 188 aaKnown RBP2.83□□□□□ -1.96
MDM2-228ENST00000542502 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 LOC107984640A0A0U1RRK4 108 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 C11orf86A6NJI1 115 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 SYS1-DBNDD2H3BUS1 97 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 LECT2O14960 151 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 FABP4P15090 132 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 COX17Q14061 63 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 PMCHL1Q16048 86 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 TMEM170BQ5T4T1 132 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 C15orf56Q8N910 161 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 CARD19Q96LW7 228 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 RYR2Q92736 4967 aa2.82□□□□□ -1.96
MDM2-228ENST00000542502 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.81□□□□□ -1.96
MDM2-228ENST00000542502 IGKCP01834 107 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 TLX1NBP0CAT3 122 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 NMUP48645 174 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 COX6A2Q02221 97 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 Q1RN00 199 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 COPS9Q8WXC6 57 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 PLEKHB2Q96CS7 222 aa2.81□□□□□ -1.96
MDM2-228ENST00000542502 DNAH17Q9UFH2 4485 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 PKD1P98161 4303 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 MYMXA0A1B0GTQ4 84 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 TMEM223A0PJW6 202 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 HSBP1L1C9JCN9 74 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 NDUFC2-KCTD14E9PQ53 114 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 H0Y8G0 127 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 ZNF22P17026 224 aaPredicted RBP2.8□□□□□ -1.96
MDM2-228ENST00000542502 KRTDAPP60985 99 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 CXCL6P80162 114 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 CIRBPQ14011 172 aaKnown RBP2.8□□□□□ -1.96
MDM2-228ENST00000542502 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 SDIM1Q6ZPB5 146 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 DPH3Q96FX2 82 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
MDM2-228ENST00000542502 DNAH10Q8IVF4 4471 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 LEPROTO15243 131 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 NUPR1O60356 82 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 SPINK8P0C7L1 97 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 C3orf79P0CE67 100 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 WFDC2Q14508 124 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 KIAA0087Q14695 138 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 Q6ZSA8 131 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 HIST3H2BBQ8N257 126 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 HIST1H2BLQ99880 126 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 CBY1Q9Y3M2 126 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 HYDINQ4G0P3 5121 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 RYR3Q15413 4870 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
MDM2-228ENST00000542502 E9PLD3 99 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 J3QQQ9 107 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
MDM2-228ENST00000542502 UNQ6190/PRO20217Q6UXQ8 127 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 Q6ZRU5 148 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 C7orf33Q8WU49 177 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 NDUFA12Q9UI09 145 aa2.78□□□□□ -1.96
MDM2-228ENST00000542502 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
MDM2-228ENST00000542502 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 TIMM17BO60830 172 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 S100A12P80511 92 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 RPL18AQ02543 176 aaKnown RBP2.77□□□□□ -1.97
MDM2-228ENST00000542502 Q6ZVH6 145 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 SPACA4Q8TDM5 124 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 ZNF625Q96I27 306 aaPredicted RBP2.77□□□□□ -1.97
MDM2-228ENST00000542502 MIEN1Q9BRT3 115 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 PLAC8Q9NZF1 115 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 C6orf48Q9UBA6 75 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 ERG28Q9UKR5 140 aa2.77□□□□□ -1.97
MDM2-228ENST00000542502 A0A0J9YXY3 114 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 LINC00158P58513 81 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 MEIG1Q5JSS6 88 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 C2orf82Q6UX34 121 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 BOD1L2Q8IYS8 172 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms