RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 A0A0U1RRA0 63 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 COX8AP10176 69 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 SCGB1D4Q6XE38 83 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 LITAFQ99732 161 aa13.23□□□□□ -0.29
MSRB3-211ENST00000541897 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
MSRB3-211ENST00000541897 DLEU1O43261 78 aa13.22□□□□□ -0.29
MSRB3-211ENST00000541897 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
MSRB3-211ENST00000541897 TMEM238C9JI98 176 aa13.21□□□□□ -0.29
MSRB3-211ENST00000541897 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
MSRB3-211ENST00000541897 FAM168BA1KXE4 195 aa13.2□□□□□ -0.3
MSRB3-211ENST00000541897 HAMPP81172 84 aa13.2□□□□□ -0.3
MSRB3-211ENST00000541897 KRTAP7-1Q8IUC3 87 aa13.2□□□□□ -0.3
MSRB3-211ENST00000541897 ADAMTSL4-AS1Q5T5F5 129 aa13.19□□□□□ -0.3
MSRB3-211ENST00000541897 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
MSRB3-211ENST00000541897 SMIM6P0DI80 62 aa13.18□□□□□ -0.3
MSRB3-211ENST00000541897 RPL24P83731 157 aaKnown RBP13.18□□□□□ -0.3
MSRB3-211ENST00000541897 SERTAD4-AS1Q5TG53 156 aa13.18□□□□□ -0.3
MSRB3-211ENST00000541897 Q6ZVH6 145 aa13.18□□□□□ -0.3
MSRB3-211ENST00000541897 FAM19A5Q7Z5A7 132 aaPredicted RBP13.18□□□□□ -0.3
MSRB3-211ENST00000541897 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
MSRB3-211ENST00000541897 SPANXCQ9NY87 97 aa13.18□□□□□ -0.3
MSRB3-211ENST00000541897 S100A12P80511 92 aa13.17□□□□□ -0.3
MSRB3-211ENST00000541897 DAND5Q8N907 189 aa13.17□□□□□ -0.3
MSRB3-211ENST00000541897 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
MSRB3-211ENST00000541897 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
MSRB3-211ENST00000541897 DMBT1Q9UGM3 2413 aaPredicted RBP13.15□□□□□ -0.3
MSRB3-211ENST00000541897 M0QXV9 152 aa13.15□□□□□ -0.3
MSRB3-211ENST00000541897 INAFM2P0DMQ5 153 aa13.15□□□□□ -0.3
MSRB3-211ENST00000541897 VPREB1P12018 145 aa13.15□□□□□ -0.3
MSRB3-211ENST00000541897 C14orf144Q96I85 54 aa13.15□□□□□ -0.3
MSRB3-211ENST00000541897 C22orf24Q9Y442 160 aa13.15□□□□□ -0.3
MSRB3-211ENST00000541897 VPS13BQ7Z7G8 4022 aa13.14□□□□□ -0.31
MSRB3-211ENST00000541897 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
MSRB3-211ENST00000541897 COPS9Q8WXC6 57 aa13.14□□□□□ -0.31
MSRB3-211ENST00000541897 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
MSRB3-211ENST00000541897 IFITM1P13164 125 aa13.13□□□□□ -0.31
MSRB3-211ENST00000541897 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-211ENST00000541897 Q5VSD8 79 aa13.13□□□□□ -0.31
MSRB3-211ENST00000541897 LINC00308Q8TCZ7 52 aa13.13□□□□□ -0.31
MSRB3-211ENST00000541897 C7orf33Q8WU49 177 aa13.13□□□□□ -0.31
MSRB3-211ENST00000541897 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-211ENST00000541897 NDUFC2O95298 119 aa13.12□□□□□ -0.31
MSRB3-211ENST00000541897 SMR3BP02814 79 aaPredicted RBP13.12□□□□□ -0.31
MSRB3-211ENST00000541897 SOSTDC1Q6X4U4 206 aa13.12□□□□□ -0.31
MSRB3-211ENST00000541897 NKAPP1Q8N9T2 125 aa13.12□□□□□ -0.31
MSRB3-211ENST00000541897 PHF5AQ7RTV0 110 aaKnown RBP13.11□□□□□ -0.31
MSRB3-211ENST00000541897 MRPL55Q7Z7F7 128 aaKnown RBP13.11□□□□□ -0.31
MSRB3-211ENST00000541897 LINC00528Q8N1L1 170 aa13.1□□□□□ -0.31
MSRB3-211ENST00000541897 Q8NDZ9 215 aa13.1□□□□□ -0.31
MSRB3-211ENST00000541897 HIGD1BQ9P298 99 aa13.1□□□□□ -0.31
MSRB3-211ENST00000541897 SRRM2Q9UQ35 2752 aaKnown RBP13.09□□□□□ -0.31
MSRB3-211ENST00000541897 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
MSRB3-211ENST00000541897 MYCBP2O75592 4640 aa13.08□□□□□ -0.32
MSRB3-211ENST00000541897 TRBV10-2A0A0K0K1G8 114 aa13.07□□□□□ -0.32
MSRB3-211ENST00000541897 FAM229AH3BQW9 127 aa13.07□□□□□ -0.32
MSRB3-211ENST00000541897 NPC2P61916 151 aa13.07□□□□□ -0.32
MSRB3-211ENST00000541897 M0R378 163 aa13.06□□□□□ -0.32
MSRB3-211ENST00000541897 SRSF9Q13242 221 aaKnown RBP eCLIP13.06□□□□□ -0.32
MSRB3-211ENST00000541897 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
MSRB3-211ENST00000541897 UBE2BP63146 152 aa13.04□□□□□ -0.32
MSRB3-211ENST00000541897 C2orf91Q6ZV80 131 aa13.04□□□□□ -0.32
MSRB3-211ENST00000541897 MUSTN1Q8IVN3 82 aa13.04□□□□□ -0.32
MSRB3-211ENST00000541897 UQCR10Q9UDW1 63 aa13.03□□□□□ -0.32
MSRB3-211ENST00000541897 PLA2G1BP04054 148 aaKnown RBP13.02□□□□□ -0.33
MSRB3-211ENST00000541897 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
MSRB3-211ENST00000541897 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
MSRB3-211ENST00000541897 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
MSRB3-211ENST00000541897 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
MSRB3-211ENST00000541897 HIST1H4GQ99525 98 aa13.01□□□□□ -0.33
MSRB3-211ENST00000541897 NCR3O14931 201 aa13□□□□□ -0.33
MSRB3-211ENST00000541897 TAL2Q16559 108 aa13□□□□□ -0.33
MSRB3-211ENST00000541897 KRTAP11-1Q8IUC1 163 aa13□□□□□ -0.33
MSRB3-211ENST00000541897 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
MSRB3-211ENST00000541897 GAGE10A6NGK3 116 aa12.99□□□□□ -0.33
MSRB3-211ENST00000541897 C12orf57Q99622 126 aa12.99□□□□□ -0.33
MSRB3-211ENST00000541897 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
MSRB3-211ENST00000541897 KRTAP10-4P60372 401 aaPredicted RBP12.98□□□□□ -0.33
MSRB3-211ENST00000541897 IGKV2-28A0A075B6P5 120 aa12.97□□□□□ -0.33
MSRB3-211ENST00000541897 IGKV2D-28P01615 120 aa12.97□□□□□ -0.33
MSRB3-211ENST00000541897 IGLV6-57P01721 117 aa12.95□□□□□ -0.34
MSRB3-211ENST00000541897 DDTP30046 118 aa12.95□□□□□ -0.34
MSRB3-211ENST00000541897 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
MSRB3-211ENST00000541897 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
MSRB3-211ENST00000541897 KCNQ1DNQ9H478 68 aa12.94□□□□□ -0.34
MSRB3-211ENST00000541897 CBY1Q9Y3M2 126 aa12.94□□□□□ -0.34
MSRB3-211ENST00000541897 PRYO14603 147 aa12.93□□□□□ -0.34
MSRB3-211ENST00000541897 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
MSRB3-211ENST00000541897 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
MSRB3-211ENST00000541897 A4D1N5 150 aa12.92□□□□□ -0.34
MSRB3-211ENST00000541897 PRO1933Q9H354 126 aa12.92□□□□□ -0.34
MSRB3-211ENST00000541897 BCE1O60756 84 aa12.91□□□□□ -0.34
MSRB3-211ENST00000541897 HSD52Q0P140 79 aa12.91□□□□□ -0.34
MSRB3-211ENST00000541897 REG3GQ6UW15 175 aa12.91□□□□□ -0.34
MSRB3-211ENST00000541897 CEND1Q8N111 149 aa12.91□□□□□ -0.34
MSRB3-211ENST00000541897 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
MSRB3-211ENST00000541897 TRAV13-2A0A0B4J235 113 aa12.9□□□□□ -0.34
MSRB3-211ENST00000541897 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
MSRB3-211ENST00000541897 TSTD3H0UI37 97 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms