RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 PCP2Q8IVA1 136 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 BOD1L2Q8IYS8 172 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 LITAFQ99732 161 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 PAM16Q9Y3D7 125 aa3.18□□□□□ -1.9
SPARCL1-209ENST00000541496 RYR2Q92736 4967 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 A0A096LNI7 61 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 LOC107984156A0A0G2JMH3 177 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 PFN2P35080 140 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 LINC00158P58513 81 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 S100A12P80511 92 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 LINC01620Q4KN68 170 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 Q6ZVH6 145 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 ARL17AQ8IVW1 177 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
SPARCL1-209ENST00000541496 TMEM238C9JI98 176 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 PANO1I0J062 215 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SMIM13P0DJ93 91 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 C9orf129Q5T035 196 aaKnown RBP3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SLC25A34Q6PIV7 304 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SCGB1D4Q6XE38 83 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 MIR7-3HGQ8N6C7 128 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SPANXDQ9BXN6 97 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SND1-IT1Q9HBX3 110 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 SPANXCQ9NY87 97 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 HIGD1BQ9P298 99 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
SPARCL1-209ENST00000541496 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
SPARCL1-209ENST00000541496 DNAH17Q9UFH2 4485 aa3.15□□□□□ -1.9
SPARCL1-209ENST00000541496 IGLV5-37A0A075B6J1 123 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 A0A087WYN8 130 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 IGKV2-24A0A0C4DH68 120 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 CDK2AP2O75956 126 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 CHTF8P0CG12 524 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 IFITM1P13164 125 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 COPS9Q8WXC6 57 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 C14orf144Q96I85 54 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 XAGE1AQ9HD64 81 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 SPANXB1Q9NS25 103 aaPredicted RBP3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 UQCR10Q9UDW1 63 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 TP73-AS1Q9UF72 201 aa3.15□□□□□ -1.91
SPARCL1-209ENST00000541496 A0A0U1RRA0 63 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 NDUFC2O95298 119 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 VPREB1P12018 145 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 XGP55808 180 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 SOSTDC1Q6X4U4 206 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 C2orf91Q6ZV80 131 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 SCXQ7RTU7 201 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 CIRBP-AS1Q8TBR5 109 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 C12orf57Q99622 126 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 HYDINQ4G0P3 5121 aa3.14□□□□□ -1.91
SPARCL1-209ENST00000541496 RYR3Q15413 4870 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 TRBV10-2A0A0K0K1G8 114 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 TAL2Q16559 108 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 SERTAD4-AS1Q5TG53 156 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 DAND5Q8N907 189 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 Q8NDZ9 215 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
SPARCL1-209ENST00000541496 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 M0QXV9 152 aa3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 SRSF9Q13242 221 aaKnown RBP eCLIP3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 LBHQ53QV2 105 aaPredicted RBP3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 MRPL55Q7Z7F7 128 aaKnown RBP3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 DPH3Q96FX2 82 aa3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
SPARCL1-209ENST00000541496 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 IGKV2-28A0A075B6P5 120 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 TSTD3H0UI37 97 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 M0R378 163 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 IGKV2D-28P01615 120 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 HSD52Q0P140 79 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 FAM19A5Q7Z5A7 132 aaPredicted RBP3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 MUSTN1Q8IVN3 82 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 C7orf33Q8WU49 177 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 HIST1H4GQ99525 98 aa3.11□□□□□ -1.91
SPARCL1-209ENST00000541496 HECTD4Q9Y4D8 3996 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 A4D1N5 150 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 IGLV6-57P01721 117 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 HNRNPA3P51991 378 aaKnown RBP3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 NPC2P61916 151 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 PRR3P79522 188 aaKnown RBP3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 HAMPP81172 84 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 PHF5AQ7RTV0 110 aaKnown RBP3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 CEND1Q8N111 149 aa3.1□□□□□ -1.91
SPARCL1-209ENST00000541496 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms