RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 FAT4Q6V0I7 4981 aa13.94□□□□□ -0.18
LEMD3-203ENST00000541171 TRAV12-1A0A0B4J245 112 aa13.93□□□□□ -0.18
LEMD3-203ENST00000541171 ZNF22P17026 224 aaPredicted RBP13.93□□□□□ -0.18
LEMD3-203ENST00000541171 LINC00310P59036 64 aa13.93□□□□□ -0.18
LEMD3-203ENST00000541171 SERF1AO75920 110 aa13.92□□□□□ -0.18
LEMD3-203ENST00000541171 TMEM238C9JI98 176 aa13.91□□□□□ -0.18
LEMD3-203ENST00000541171 IGLV5-39A0A0G2JS06 123 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 VPREB1P12018 145 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 KRTAP9-2Q9BYQ4 174 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 TMEM126AQ9H061 195 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 SND1-IT1Q9HBX3 110 aa13.9□□□□□ -0.18
LEMD3-203ENST00000541171 C11orf86A6NJI1 115 aa13.89□□□□□ -0.19
LEMD3-203ENST00000541171 CDIP1Q9H305 208 aa13.89□□□□□ -0.19
LEMD3-203ENST00000541171 CHTOPQ9Y3Y2 248 aaKnown RBP13.89□□□□□ -0.19
LEMD3-203ENST00000541171 ZNF625Q96I27 306 aaPredicted RBP13.88□□□□□ -0.19
LEMD3-203ENST00000541171 ERG28Q9UKR5 140 aa13.88□□□□□ -0.19
LEMD3-203ENST00000541171 IGLV7-46A0A075B6I9 117 aa13.86□□□□□ -0.19
LEMD3-203ENST00000541171 LEPROTL1O95214 131 aa13.86□□□□□ -0.19
LEMD3-203ENST00000541171 RPL24P83731 157 aaKnown RBP13.86□□□□□ -0.19
LEMD3-203ENST00000541171 M0R378 163 aa13.85□□□□□ -0.19
LEMD3-203ENST00000541171 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
LEMD3-203ENST00000541171 LCE2AQ5TA79 106 aaPredicted RBP13.84□□□□□ -0.19
LEMD3-203ENST00000541171 HSPB8Q9UJY1 196 aa13.84□□□□□ -0.19
LEMD3-203ENST00000541171 HIST1H2BKO60814 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BJP06899 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BOP23527 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BBP33778 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BDP58876 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BCP62807 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST2H2BEQ16778 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 TPRXLQ17RH7 258 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.83□□□□□ -0.2
LEMD3-203ENST00000541171 C3orf22Q8N5N4 141 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 Q8NDZ9 215 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BHQ93079 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 PLEKHB2Q96CS7 222 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BNQ99877 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 HIST1H2BMQ99879 126 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 MUC17Q685J3 4493 aa13.83□□□□□ -0.2
LEMD3-203ENST00000541171 SFTA2Q6UW10 78 aa13.82□□□□□ -0.2
LEMD3-203ENST00000541171 COX17Q14061 63 aa13.81□□□□□ -0.2
LEMD3-203ENST00000541171 HIGD2AQ9BW72 106 aa13.81□□□□□ -0.2
LEMD3-203ENST00000541171 TMEM223A0PJW6 202 aa13.78□□□□□ -0.2
LEMD3-203ENST00000541171 S100A1P23297 94 aa13.77□□□□□ -0.21
LEMD3-203ENST00000541171 PPDPFQ9H3Y8 114 aa13.77□□□□□ -0.21
LEMD3-203ENST00000541171 CTAG1AP78358 180 aa13.76□□□□□ -0.21
LEMD3-203ENST00000541171 FABP4P15090 132 aa13.75□□□□□ -0.21
LEMD3-203ENST00000541171 PLNP26678 52 aa13.75□□□□□ -0.21
LEMD3-203ENST00000541171 LINC00158P58513 81 aa13.75□□□□□ -0.21
LEMD3-203ENST00000541171 A0A0U1RRA0 63 aa13.74□□□□□ -0.21
LEMD3-203ENST00000541171 H0Y8G0 127 aa13.74□□□□□ -0.21
LEMD3-203ENST00000541171 SPRR4Q96PI1 79 aa13.72□□□□□ -0.21
LEMD3-203ENST00000541171 MAP1LC3CQ9BXW4 147 aa13.72□□□□□ -0.21
LEMD3-203ENST00000541171 COA6Q5JTJ3 125 aaKnown RBP13.71□□□□□ -0.21
LEMD3-203ENST00000541171 SPAG11AQ6PDA7 123 aa13.71□□□□□ -0.21
LEMD3-203ENST00000541171 ATP6V1G1O75348 118 aa13.7□□□□□ -0.22
LEMD3-203ENST00000541171 DPM2O94777 84 aa13.7□□□□□ -0.22
LEMD3-203ENST00000541171 C4orf48Q5BLP8 95 aa13.69□□□□□ -0.22
LEMD3-203ENST00000541171 IGKCP01834 107 aa13.66□□□□□ -0.22
LEMD3-203ENST00000541171 DAND5Q8N907 189 aa13.66□□□□□ -0.22
LEMD3-203ENST00000541171 ZNF706Q9Y5V0 76 aaPredicted RBP13.66□□□□□ -0.22
LEMD3-203ENST00000541171 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
LEMD3-203ENST00000541171 HERVK_113P61574 105 aa13.64□□□□□ -0.23
LEMD3-203ENST00000541171 HERV-K104P63124 156 aa13.64□□□□□ -0.23
LEMD3-203ENST00000541171 Q8NBF4 154 aa13.64□□□□□ -0.23
LEMD3-203ENST00000541171 NCR3O14931 201 aa13.63□□□□□ -0.23
LEMD3-203ENST00000541171 SMIM13P0DJ93 91 aa13.63□□□□□ -0.23
LEMD3-203ENST00000541171 FP248Q71RG6 208 aaPredicted RBP13.63□□□□□ -0.23
LEMD3-203ENST00000541171 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
LEMD3-203ENST00000541171 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
LEMD3-203ENST00000541171 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
LEMD3-203ENST00000541171 PRYO14603 147 aa13.62□□□□□ -0.23
LEMD3-203ENST00000541171 LEPROTO15243 131 aa13.62□□□□□ -0.23
LEMD3-203ENST00000541171 SMCR5Q8TEV8 140 aa13.62□□□□□ -0.23
LEMD3-203ENST00000541171 NDUFA12Q9UI09 145 aa13.62□□□□□ -0.23
LEMD3-203ENST00000541171 MEIG1Q5JSS6 88 aa13.61□□□□□ -0.23
LEMD3-203ENST00000541171 MYMXA0A1B0GTQ4 84 aa13.6□□□□□ -0.23
LEMD3-203ENST00000541171 LINC00587B1AMM8 73 aa13.6□□□□□ -0.23
LEMD3-203ENST00000541171 PET117Q6UWS5 81 aa13.6□□□□□ -0.23
LEMD3-203ENST00000541171 TSPEAR-AS2P59090 65 aa13.59□□□□□ -0.23
LEMD3-203ENST00000541171 LINC01545Q5VT33 79 aa13.59□□□□□ -0.23
LEMD3-203ENST00000541171 ETDCA0A1B0GVM5 59 aa13.58□□□□□ -0.24
LEMD3-203ENST00000541171 J3QQQ9 107 aa13.58□□□□□ -0.24
LEMD3-203ENST00000541171 MIR7-3HGQ8N6C7 128 aa13.58□□□□□ -0.24
LEMD3-203ENST00000541171 NMUP48645 174 aa13.57□□□□□ -0.24
LEMD3-203ENST00000541171 KCNQ1DNQ9H478 68 aa13.57□□□□□ -0.24
LEMD3-203ENST00000541171 KRTAP9-6A0A140TA67 174 aa13.56□□□□□ -0.24
LEMD3-203ENST00000541171 SPRR1AP35321 89 aa13.56□□□□□ -0.24
LEMD3-203ENST00000541171 KRTAP13-3Q3SY46 172 aa13.56□□□□□ -0.24
LEMD3-203ENST00000541171 E9PLD3 99 aa13.54□□□□□ -0.24
LEMD3-203ENST00000541171 C3orf79P0CE67 100 aa13.54□□□□□ -0.24
LEMD3-203ENST00000541171 LGALS3P17931 250 aaKnown RBP13.54□□□□□ -0.24
LEMD3-203ENST00000541171 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
LEMD3-203ENST00000541171 GAGE2AQ6NT46 116 aa13.53□□□□□ -0.24
LEMD3-203ENST00000541171 KRTAP4-16G5E9R7 235 aaPredicted RBP13.52□□□□□ -0.25
LEMD3-203ENST00000541171 SPINK1P00995 79 aa13.52□□□□□ -0.25
LEMD3-203ENST00000541171 ASB16-AS1Q495Z4 193 aa13.5□□□□□ -0.25
LEMD3-203ENST00000541171 IGLV9-49A0A0B4J1Y8 123 aa13.49□□□□□ -0.25
LEMD3-203ENST00000541171 KRTDAPP60985 99 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms