RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 FAM218AQ96MZ4 157 aa13.56□□□□□ -0.24
PACSIN3-211ENST00000539589 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
PACSIN3-211ENST00000539589 LINC01556Q5JQF7 62 aa13.56□□□□□ -0.24
PACSIN3-211ENST00000539589 LINC00588Q9Y4M8 146 aa13.54□□□□□ -0.24
PACSIN3-211ENST00000539589 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
PACSIN3-211ENST00000539589 KRTAP26-1Q6PEX3 210 aa13.53□□□□□ -0.24
PACSIN3-211ENST00000539589 CDIP1Q9H305 208 aa13.53□□□□□ -0.24
PACSIN3-211ENST00000539589 PRR3P79522 188 aaKnown RBP13.52□□□□□ -0.25
PACSIN3-211ENST00000539589 ZNF561-AS1K7EIQ3 104 aa13.51□□□□□ -0.25
PACSIN3-211ENST00000539589 BAALC-AS2P0C853 105 aa13.51□□□□□ -0.25
PACSIN3-211ENST00000539589 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
PACSIN3-211ENST00000539589 TMEM126AQ9H061 195 aa13.51□□□□□ -0.25
PACSIN3-211ENST00000539589 FBN3Q75N90 2809 aa13.5□□□□□ -0.25
PACSIN3-211ENST00000539589 DNAH10OSP0CZ25 163 aa13.49□□□□□ -0.25
PACSIN3-211ENST00000539589 C6orf48Q9UBA6 75 aa13.49□□□□□ -0.25
PACSIN3-211ENST00000539589 TENM2Q9NT68 2774 aa13.48□□□□□ -0.25
PACSIN3-211ENST00000539589 DNAL4O96015 105 aa13.48□□□□□ -0.25
PACSIN3-211ENST00000539589 VPS13DQ5THJ4 4388 aa13.48□□□□□ -0.25
PACSIN3-211ENST00000539589 A0A087WYN8 130 aa13.47□□□□□ -0.25
PACSIN3-211ENST00000539589 HIGD2BQ4VC39 106 aa13.47□□□□□ -0.25
PACSIN3-211ENST00000539589 CAMK2N2Q96S95 79 aa13.47□□□□□ -0.25
PACSIN3-211ENST00000539589 Q9HAA7 133 aa13.47□□□□□ -0.25
PACSIN3-211ENST00000539589 APLNQ9ULZ1 77 aa13.47□□□□□ -0.25
PACSIN3-211ENST00000539589 IGKV2D-24A0A075B6R9 120 aa13.46□□□□□ -0.26
PACSIN3-211ENST00000539589 NCR3O14931 201 aa13.45□□□□□ -0.26
PACSIN3-211ENST00000539589 Q8NDZ9 215 aa13.45□□□□□ -0.26
PACSIN3-211ENST00000539589 C21orf62-AS1Q17RA5 79 aa13.44□□□□□ -0.26
PACSIN3-211ENST00000539589 S100A7L2Q5SY68 101 aa13.44□□□□□ -0.26
PACSIN3-211ENST00000539589 C15orf56Q8N910 161 aa13.44□□□□□ -0.26
PACSIN3-211ENST00000539589 C2orf48Q96LS8 159 aa13.44□□□□□ -0.26
PACSIN3-211ENST00000539589 DNAH10Q8IVF4 4471 aa13.43□□□□□ -0.26
PACSIN3-211ENST00000539589 LECT2O14960 151 aa13.42□□□□□ -0.26
PACSIN3-211ENST00000539589 UPK3BQ9BT76 320 aa13.42□□□□□ -0.26
PACSIN3-211ENST00000539589 F8WDY8 70 aa13.4□□□□□ -0.26
PACSIN3-211ENST00000539589 SCGB1A1P11684 91 aa13.4□□□□□ -0.26
PACSIN3-211ENST00000539589 XGP55808 180 aa13.4□□□□□ -0.26
PACSIN3-211ENST00000539589 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
PACSIN3-211ENST00000539589 Q6ZRU5 148 aa13.39□□□□□ -0.27
PACSIN3-211ENST00000539589 TGP01266 2768 aa13.39□□□□□ -0.27
PACSIN3-211ENST00000539589 A0A1B0GX51 115 aa13.39□□□□□ -0.27
PACSIN3-211ENST00000539589 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
PACSIN3-211ENST00000539589 FAM240AA0A1B0GVK7 77 aa13.38□□□□□ -0.27
PACSIN3-211ENST00000539589 MT-ATP8P03928 68 aa13.38□□□□□ -0.27
PACSIN3-211ENST00000539589 NUPR2A6NF83 97 aa13.37□□□□□ -0.27
PACSIN3-211ENST00000539589 RPL18AQ02543 176 aaKnown RBP13.37□□□□□ -0.27
PACSIN3-211ENST00000539589 IGLV6-57P01721 117 aa13.36□□□□□ -0.27
PACSIN3-211ENST00000539589 C6orf99Q4VX62 202 aa13.36□□□□□ -0.27
PACSIN3-211ENST00000539589 NDUFC2-KCTD14E9PQ53 114 aa13.35□□□□□ -0.27
PACSIN3-211ENST00000539589 SNCGO76070 127 aa13.35□□□□□ -0.27
PACSIN3-211ENST00000539589 INAFM2P0DMQ5 153 aa13.35□□□□□ -0.27
PACSIN3-211ENST00000539589 Q8N814 137 aa13.34□□□□□ -0.27
PACSIN3-211ENST00000539589 ORMDL1Q9P0S3 153 aa13.34□□□□□ -0.27
PACSIN3-211ENST00000539589 SYCNQ0VAF6 134 aa13.33□□□□□ -0.28
PACSIN3-211ENST00000539589 LINC00167Q96N53 147 aa13.33□□□□□ -0.28
PACSIN3-211ENST00000539589 SLPIP03973 132 aa13.32□□□□□ -0.28
PACSIN3-211ENST00000539589 ACYP1P07311 99 aa13.32□□□□□ -0.28
PACSIN3-211ENST00000539589 RMI2Q96E14 147 aa13.32□□□□□ -0.28
PACSIN3-211ENST00000539589 KRTAP1-5Q9BYS1 174 aa13.3□□□□□ -0.28
PACSIN3-211ENST00000539589 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
PACSIN3-211ENST00000539589 UBE2DNLQ8IWF7 75 aa13.3□□□□□ -0.28
PACSIN3-211ENST00000539589 GAGE2EQ4V326 116 aa13.29□□□□□ -0.28
PACSIN3-211ENST00000539589 GAGE2DQ9UEU5 116 aa13.29□□□□□ -0.28
PACSIN3-211ENST00000539589 VPREB1P12018 145 aa13.29□□□□□ -0.28
PACSIN3-211ENST00000539589 LINC00575Q6W349 94 aa13.29□□□□□ -0.28
PACSIN3-211ENST00000539589 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
PACSIN3-211ENST00000539589 TRAV23DV6A0A075B6W5 121 aa13.27□□□□□ -0.29
PACSIN3-211ENST00000539589 CASC10Q5T4H9 136 aa13.27□□□□□ -0.29
PACSIN3-211ENST00000539589 Q6ZRP5 223 aa13.27□□□□□ -0.29
PACSIN3-211ENST00000539589 M0R378 163 aa13.26□□□□□ -0.29
PACSIN3-211ENST00000539589 TMEM256-PLSCR3K7ERE1 68 aa13.25□□□□□ -0.29
PACSIN3-211ENST00000539589 USP17L23D6RBM5 183 aa13.25□□□□□ -0.29
PACSIN3-211ENST00000539589 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
PACSIN3-211ENST00000539589 DIRC1Q969H9 104 aa13.25□□□□□ -0.29
PACSIN3-211ENST00000539589 hADV29S1A0JD25 119 aa13.23□□□□□ -0.29
PACSIN3-211ENST00000539589 KMT2AQ03164 3969 aa13.23□□□□□ -0.29
PACSIN3-211ENST00000539589 GAGE2AQ6NT46 116 aa13.22□□□□□ -0.29
PACSIN3-211ENST00000539589 C14orf132Q9NPU4 83 aa13.22□□□□□ -0.29
PACSIN3-211ENST00000539589 ZNF73O43830 326 aaPredicted RBP13.22□□□□□ -0.29
PACSIN3-211ENST00000539589 DNAH2Q9P225 4427 aa13.21□□□□□ -0.29
PACSIN3-211ENST00000539589 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
PACSIN3-211ENST00000539589 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
PACSIN3-211ENST00000539589 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
PACSIN3-211ENST00000539589 JMJD7-PLA2G4BH0Y9G9 81 aa13.19□□□□□ -0.3
PACSIN3-211ENST00000539589 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
PACSIN3-211ENST00000539589 COX7BP24311 80 aa13.17□□□□□ -0.3
PACSIN3-211ENST00000539589 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
PACSIN3-211ENST00000539589 Q6Q795 121 aa13.16□□□□□ -0.3
PACSIN3-211ENST00000539589 ELOF1P60002 83 aaKnown RBP13.15□□□□□ -0.3
PACSIN3-211ENST00000539589 NKAPP1Q8N9T2 125 aa13.15□□□□□ -0.3
PACSIN3-211ENST00000539589 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
PACSIN3-211ENST00000539589 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
PACSIN3-211ENST00000539589 H3BQ85 93 aa13.14□□□□□ -0.31
PACSIN3-211ENST00000539589 A0A1B0GV72 72 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 LINC00643Q86TS7 51 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 SMCR5Q8TEV8 140 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 WWC2-AS2Q96NR7 200 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 PLA2G2DQ9UNK4 145 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 ALMS1Q8TCU4 4167 aa13.13□□□□□ -0.31
PACSIN3-211ENST00000539589 Q6ZQY7 126 aa13.12□□□□□ -0.31
PACSIN3-211ENST00000539589 SERTAD4-AS1Q5TG53 156 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms