RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 J3QQQ9 107 aa8.63□□□□□ -1.03
CCND1-204ENST00000539241 TSPEAR-AS2P59090 65 aa8.63□□□□□ -1.03
CCND1-204ENST00000539241 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
CCND1-204ENST00000539241 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
CCND1-204ENST00000539241 HERV-K104P63124 156 aa8.62□□□□□ -1.03
CCND1-204ENST00000539241 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
CCND1-204ENST00000539241 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
CCND1-204ENST00000539241 NMUP48645 174 aa8.61□□□□□ -1.03
CCND1-204ENST00000539241 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
CCND1-204ENST00000539241 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
CCND1-204ENST00000539241 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
CCND1-204ENST00000539241 COX17Q14061 63 aa8.6□□□□□ -1.03
CCND1-204ENST00000539241 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
CCND1-204ENST00000539241 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CCND1-204ENST00000539241 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
CCND1-204ENST00000539241 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
CCND1-204ENST00000539241 PFN2P35080 140 aa8.58□□□□□ -1.04
CCND1-204ENST00000539241 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
CCND1-204ENST00000539241 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
CCND1-204ENST00000539241 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
CCND1-204ENST00000539241 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
CCND1-204ENST00000539241 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
CCND1-204ENST00000539241 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
CCND1-204ENST00000539241 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
CCND1-204ENST00000539241 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
CCND1-204ENST00000539241 LINC00158P58513 81 aa8.55□□□□□ -1.04
CCND1-204ENST00000539241 JOSD1Q15040 202 aaPredicted RBP8.55□□□□□ -1.04
CCND1-204ENST00000539241 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
CCND1-204ENST00000539241 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
CCND1-204ENST00000539241 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
CCND1-204ENST00000539241 A0A0U1RRA0 63 aa8.53□□□□□ -1.04
CCND1-204ENST00000539241 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
CCND1-204ENST00000539241 TTTY13Q9BZ97 58 aa8.53□□□□□ -1.04
CCND1-204ENST00000539241 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
CCND1-204ENST00000539241 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
CCND1-204ENST00000539241 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
CCND1-204ENST00000539241 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
CCND1-204ENST00000539241 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
CCND1-204ENST00000539241 DIRC1Q969H9 104 aa8.51□□□□□ -1.05
CCND1-204ENST00000539241 TIMM17BO60830 172 aa8.5□□□□□ -1.05
CCND1-204ENST00000539241 PYY3Q5JQD4 70 aa8.5□□□□□ -1.05
CCND1-204ENST00000539241 M0QXV9 152 aa8.49□□□□□ -1.05
CCND1-204ENST00000539241 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
CCND1-204ENST00000539241 VAMP8Q9BV40 100 aa8.49□□□□□ -1.05
CCND1-204ENST00000539241 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 DAND5Q8N907 189 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 LITAFQ99732 161 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
CCND1-204ENST00000539241 H0Y9J4 135 aa8.47□□□□□ -1.05
CCND1-204ENST00000539241 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
CCND1-204ENST00000539241 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
CCND1-204ENST00000539241 C22orf24Q9Y442 160 aa8.47□□□□□ -1.05
CCND1-204ENST00000539241 LPAP08519 4548 aa8.46□□□□□ -1.05
CCND1-204ENST00000539241 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 TMEM238C9JI98 176 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 VPREB1P12018 145 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 UBE2BP63146 152 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 PAM16Q9Y3D7 125 aa8.46□□□□□ -1.06
CCND1-204ENST00000539241 COX8AP10176 69 aa8.45□□□□□ -1.06
CCND1-204ENST00000539241 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
CCND1-204ENST00000539241 LBHQ53QV2 105 aaPredicted RBP8.45□□□□□ -1.06
CCND1-204ENST00000539241 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
CCND1-204ENST00000539241 Q8NDZ9 215 aa8.44□□□□□ -1.06
CCND1-204ENST00000539241 DLEU1O43261 78 aa8.43□□□□□ -1.06
CCND1-204ENST00000539241 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
CCND1-204ENST00000539241 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
CCND1-204ENST00000539241 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
CCND1-204ENST00000539241 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
CCND1-204ENST00000539241 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
CCND1-204ENST00000539241 Q6ZVH6 145 aa8.42□□□□□ -1.06
CCND1-204ENST00000539241 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
CCND1-204ENST00000539241 NPC2P61916 151 aa8.41□□□□□ -1.06
CCND1-204ENST00000539241 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
CCND1-204ENST00000539241 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
CCND1-204ENST00000539241 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
CCND1-204ENST00000539241 NDUFC2O95298 119 aa8.4□□□□□ -1.06
CCND1-204ENST00000539241 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
CCND1-204ENST00000539241 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
CCND1-204ENST00000539241 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.06
CCND1-204ENST00000539241 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
CCND1-204ENST00000539241 M0R378 163 aa8.39□□□□□ -1.07
CCND1-204ENST00000539241 IFITM1P13164 125 aa8.39□□□□□ -1.07
CCND1-204ENST00000539241 S100A12P80511 92 aa8.39□□□□□ -1.07
CCND1-204ENST00000539241 SLC25A34Q6PIV7 304 aa8.39□□□□□ -1.07
CCND1-204ENST00000539241 TRBV10-2A0A0K0K1G8 114 aa8.38□□□□□ -1.07
CCND1-204ENST00000539241 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
CCND1-204ENST00000539241 NCR3O14931 201 aa8.38□□□□□ -1.07
CCND1-204ENST00000539241 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
CCND1-204ENST00000539241 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
CCND1-204ENST00000539241 RPL13AP40429 203 aaKnown RBP8.37□□□□□ -1.07
CCND1-204ENST00000539241 ZNF861PO60384 105 aa8.36□□□□□ -1.07
CCND1-204ENST00000539241 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
CCND1-204ENST00000539241 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
CCND1-204ENST00000539241 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms