RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 C6orf99Q4VX62 202 aa16.73■□□□□ 0.27
RAB40C-204ENST00000538492 C3orf56Q8N813 242 aa16.73■□□□□ 0.27
RAB40C-204ENST00000538492 Q8N814 137 aa16.72■□□□□ 0.27
RAB40C-204ENST00000538492 EGFEM1PQ0D2K5 195 aa16.72■□□□□ 0.27
RAB40C-204ENST00000538492 MAST4O15021 2626 aa16.71■□□□□ 0.27
RAB40C-204ENST00000538492 TRBV7-7A0A0K0K1E9 115 aa16.71■□□□□ 0.27
RAB40C-204ENST00000538492 OBSCN-AS1Q96MR7 158 aa16.71■□□□□ 0.26
RAB40C-204ENST00000538492 C6orf48Q9UBA6 75 aa16.71■□□□□ 0.26
RAB40C-204ENST00000538492 H3BNG1 76 aa16.7■□□□□ 0.26
RAB40C-204ENST00000538492 RPL18AQ02543 176 aaKnown RBP16.69■□□□□ 0.26
RAB40C-204ENST00000538492 HIGD2BQ4VC39 106 aa16.69■□□□□ 0.26
RAB40C-204ENST00000538492 LINC00643Q86TS7 51 aa16.69■□□□□ 0.26
RAB40C-204ENST00000538492 SDIM1Q6ZPB5 146 aa16.68■□□□□ 0.26
RAB40C-204ENST00000538492 ESRGQ1W209 222 aa16.68■□□□□ 0.26
RAB40C-204ENST00000538492 XAGE1AQ9HD64 81 aa16.68■□□□□ 0.26
RAB40C-204ENST00000538492 LINC00167Q96N53 147 aa16.67■□□□□ 0.26
RAB40C-204ENST00000538492 MUC7Q8TAX7 377 aa16.65■□□□□ 0.26
RAB40C-204ENST00000538492 NOTCH1P46531 2555 aa16.65■□□□□ 0.26
RAB40C-204ENST00000538492 GVQW2A0A096LPI5 108 aaPredicted RBP16.65■□□□□ 0.26
RAB40C-204ENST00000538492 A0A1B0GX51 115 aa16.65■□□□□ 0.26
RAB40C-204ENST00000538492 ZNF561-AS1K7EIQ3 104 aa16.64■□□□□ 0.25
RAB40C-204ENST00000538492 DEFB131BA0A096LNP1 70 aa16.62■□□□□ 0.25
RAB40C-204ENST00000538492 KRTAP26-1Q6PEX3 210 aa16.62■□□□□ 0.25
RAB40C-204ENST00000538492 CAMK2N2Q96S95 79 aa16.62■□□□□ 0.25
RAB40C-204ENST00000538492 C11orf45Q8TAV5 145 aa16.61■□□□□ 0.25
RAB40C-204ENST00000538492 IGLV6-57P01721 117 aa16.6■□□□□ 0.25
RAB40C-204ENST00000538492 LINC00575Q6W349 94 aa16.6■□□□□ 0.25
RAB40C-204ENST00000538492 TMEM256-PLSCR3K7ERE1 68 aa16.59■□□□□ 0.25
RAB40C-204ENST00000538492 IMUPQ9GZP8 106 aa16.59■□□□□ 0.25
RAB40C-204ENST00000538492 FAM236AA0A1B0GUQ0 79 aa16.59■□□□□ 0.25
RAB40C-204ENST00000538492 FAM236BA0A1B0GV22 79 aa16.59■□□□□ 0.25
RAB40C-204ENST00000538492 LINC00846Q9NV44 126 aa16.59■□□□□ 0.25
RAB40C-204ENST00000538492 TRBV10-3A0A0K0K1G6 114 aa16.57■□□□□ 0.24
RAB40C-204ENST00000538492 CCDC179H3BU77 68 aa16.57■□□□□ 0.24
RAB40C-204ENST00000538492 C15orf56Q8N910 161 aa16.57■□□□□ 0.24
RAB40C-204ENST00000538492 DNAH3Q8TD57 4116 aa16.57■□□□□ 0.24
RAB40C-204ENST00000538492 Q6ZRU5 148 aa16.56■□□□□ 0.24
RAB40C-204ENST00000538492 hADV29S1A0JD25 119 aa16.55■□□□□ 0.24
RAB40C-204ENST00000538492 PRB2P02812 416 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-204ENST00000538492 C1orf43Q9BWL3 253 aa16.54■□□□□ 0.24
RAB40C-204ENST00000538492 IGKV2D-24A0A075B6R9 120 aa16.54■□□□□ 0.24
RAB40C-204ENST00000538492 JMJD7-PLA2G4BH0Y9G9 81 aa16.53■□□□□ 0.24
RAB40C-204ENST00000538492 B5MCH6 92 aa16.52■□□□□ 0.23
RAB40C-204ENST00000538492 CCKP06307 115 aa16.52■□□□□ 0.23
RAB40C-204ENST00000538492 TRAV23DV6A0A075B6W5 121 aa16.51■□□□□ 0.23
RAB40C-204ENST00000538492 LINC01556Q5JQF7 62 aa16.51■□□□□ 0.23
RAB40C-204ENST00000538492 COL6A5A8TX70 2615 aa16.51■□□□□ 0.23
RAB40C-204ENST00000538492 IGKV3D-7A0A0C4DH55 119 aa16.49■□□□□ 0.23
RAB40C-204ENST00000538492 NBEAL1Q6ZS30 2694 aa16.48■□□□□ 0.23
RAB40C-204ENST00000538492 DIRC1Q969H9 104 aa16.47■□□□□ 0.23
RAB40C-204ENST00000538492 BAHCC1Q9P281 2608 aa16.47■□□□□ 0.23
RAB40C-204ENST00000538492 VPREB1P12018 145 aa16.46■□□□□ 0.23
RAB40C-204ENST00000538492 Q6ZQY7 126 aa16.46■□□□□ 0.23
RAB40C-204ENST00000538492 NDUFC2-KCTD14E9PQ53 114 aa16.45■□□□□ 0.22
RAB40C-204ENST00000538492 ZNF73O43830 326 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-204ENST00000538492 C2orf48Q96LS8 159 aa16.45■□□□□ 0.22
RAB40C-204ENST00000538492 LAMTOR3Q9UHA4 124 aa16.43■□□□□ 0.22
RAB40C-204ENST00000538492 Q6ZRP5 223 aa16.43■□□□□ 0.22
RAB40C-204ENST00000538492 MRAPQ8TCY5 172 aa16.42■□□□□ 0.22
RAB40C-204ENST00000538492 Q6JHZ5 121 aa16.41■□□□□ 0.22
RAB40C-204ENST00000538492 DNAH10OSP0CZ25 163 aa16.39■□□□□ 0.22
RAB40C-204ENST00000538492 RBM3P98179 157 aaKnown RBP16.39■□□□□ 0.22
RAB40C-204ENST00000538492 COX7BP24311 80 aa16.39■□□□□ 0.21
RAB40C-204ENST00000538492 M0R378 163 aa16.38■□□□□ 0.21
RAB40C-204ENST00000538492 SYCNQ0VAF6 134 aa16.38■□□□□ 0.21
RAB40C-204ENST00000538492 SS18L2Q9UHA2 77 aa16.38■□□□□ 0.21
RAB40C-204ENST00000538492 TRAV10A0A0B4J240 114 aa16.36■□□□□ 0.21
RAB40C-204ENST00000538492 ELOF1P60002 83 aaKnown RBP16.36■□□□□ 0.21
RAB40C-204ENST00000538492 LINC00588Q9Y4M8 146 aa16.36■□□□□ 0.21
RAB40C-204ENST00000538492 A0A087WVE0 104 aa16.35■□□□□ 0.21
RAB40C-204ENST00000538492 Q6ZQT0 140 aa16.34■□□□□ 0.21
RAB40C-204ENST00000538492 M0R2N4 97 aa16.31■□□□□ 0.2
RAB40C-204ENST00000538492 K7EIL1 84 aa16.31■□□□□ 0.2
RAB40C-204ENST00000538492 HIST1H4AP62805 103 aaKnown RBP16.31■□□□□ 0.2
RAB40C-204ENST00000538492 TM2D3Q9BRN9 247 aa16.31■□□□□ 0.2
RAB40C-204ENST00000538492 CASC10Q5T4H9 136 aa16.3■□□□□ 0.2
RAB40C-204ENST00000538492 HUWE1Q7Z6Z7 4374 aaKnown RBP16.3■□□□□ 0.2
RAB40C-204ENST00000538492 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.3■□□□□ 0.2
RAB40C-204ENST00000538492 DSCR8Q96T75 97 aa16.29■□□□□ 0.2
RAB40C-204ENST00000538492 TRBV7-6A0A0J9YX20 115 aa16.29■□□□□ 0.2
RAB40C-204ENST00000538492 LOC110117498A0A087WWA1 95 aa16.28■□□□□ 0.2
RAB40C-204ENST00000538492 F8WDY8 70 aa16.28■□□□□ 0.2
RAB40C-204ENST00000538492 SERTAD4-AS1Q5TG53 156 aa16.27■□□□□ 0.2
RAB40C-204ENST00000538492 UBL5Q9BZL1 73 aa16.27■□□□□ 0.19
RAB40C-204ENST00000538492 LINC00528Q8N1L1 170 aa16.26■□□□□ 0.19
RAB40C-204ENST00000538492 USP17L23D6RBM5 183 aa16.25■□□□□ 0.19
RAB40C-204ENST00000538492 NKAPP1Q8N9T2 125 aa16.25■□□□□ 0.19
RAB40C-204ENST00000538492 MGAM2Q2M2H8 2515 aa16.24■□□□□ 0.19
RAB40C-204ENST00000538492 H3BQ85 93 aa16.24■□□□□ 0.19
RAB40C-204ENST00000538492 ATOX1O00244 68 aa16.23■□□□□ 0.19
RAB40C-204ENST00000538492 C3orf22Q8N5N4 141 aa16.23■□□□□ 0.19
RAB40C-204ENST00000538492 C7orf33Q8WU49 177 aa16.21■□□□□ 0.19
RAB40C-204ENST00000538492 DNAH1Q9P2D7 4330 aa16.21■□□□□ 0.19
RAB40C-204ENST00000538492 UQCRQO14949 82 aa16.2■□□□□ 0.18
RAB40C-204ENST00000538492 C9orf153Q5TBE3 101 aa16.2■□□□□ 0.18
RAB40C-204ENST00000538492 ATP5EP2Q5VTU8 51 aa16.2■□□□□ 0.18
RAB40C-204ENST00000538492 FAM19A1Q7Z5A9 133 aa16.19■□□□□ 0.18
RAB40C-204ENST00000538492 LYSTQ99698 3801 aa16.19■□□□□ 0.18
RAB40C-204ENST00000538492 FAM168BA1KXE4 195 aa16.18■□□□□ 0.18
RAB40C-204ENST00000538492 GHRHP01286 108 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms