RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 FAM218AQ96MZ4 157 aa3.77□□□□□ -1.81
DDB1-210ENST00000538129 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 F8VRH5 84 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 PANO1I0J062 215 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
DDB1-210ENST00000538129 SPACA4Q8TDM5 124 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 TOMM7Q9P0U1 55 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
DDB1-210ENST00000538129 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
DDB1-210ENST00000538129 A0A087WYN8 130 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 A0A096LNI7 61 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 EPM2AB3EWF7 344 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
DDB1-210ENST00000538129 SPINK8P0C7L1 97 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 CHTF8P0CG12 524 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 FABP4P15090 132 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 CXCL5P42830 114 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 TMEM170BQ5T4T1 132 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 C2orf82Q6UX34 121 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 MAP1LC3CQ9BXW4 147 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
DDB1-210ENST00000538129 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 TMEM223A0PJW6 202 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 PCP4L1A6NKN8 68 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 NDUFC2-KCTD14E9PQ53 114 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 PLNP26678 52 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 HAMPP81172 84 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
DDB1-210ENST00000538129 SYS1-DBNDD2H3BUS1 97 aa3.73□□□□□ -1.81
DDB1-210ENST00000538129 DPM2O94777 84 aa3.73□□□□□ -1.81
DDB1-210ENST00000538129 RPL18AQ02543 176 aaKnown RBP3.73□□□□□ -1.81
DDB1-210ENST00000538129 Q6ZRP5 223 aa3.73□□□□□ -1.81
DDB1-210ENST00000538129 STPG4Q8N801 248 aa3.73□□□□□ -1.81
DDB1-210ENST00000538129 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
DDB1-210ENST00000538129 A0A1W2PNN7 141 aa3.72□□□□□ -1.81
DDB1-210ENST00000538129 IGKCP01834 107 aa3.72□□□□□ -1.81
DDB1-210ENST00000538129 COX17Q14061 63 aa3.72□□□□□ -1.81
DDB1-210ENST00000538129 C9orf116Q5BN46 136 aaPredicted RBP3.72□□□□□ -1.81
DDB1-210ENST00000538129 Q5VSD8 79 aa3.72□□□□□ -1.81
DDB1-210ENST00000538129 C7orf33Q8WU49 177 aa3.71□□□□□ -1.82
DDB1-210ENST00000538129 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.82
DDB1-210ENST00000538129 LINC00587B1AMM8 73 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 LEPROTO15243 131 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 S100A6P06703 90 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 AKR1D1P51857 326 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 SEC61GP60059 68 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 KRTDAPP60985 99 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 HERVK_113P61574 105 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
DDB1-210ENST00000538129 LINC01545Q5VT33 79 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 PMCHL2Q9BQD1 86 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 ERG28Q9UKR5 140 aa3.7□□□□□ -1.82
DDB1-210ENST00000538129 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
DDB1-210ENST00000538129 MYMXA0A1B0GTQ4 84 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 FAM168BA1KXE4 195 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 INAFM2P0DMQ5 153 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 S100A2P29034 98 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 PFN2P35080 140 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
DDB1-210ENST00000538129 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
DDB1-210ENST00000538129 HIST3H2BBQ8N257 126 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
DDB1-210ENST00000538129 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 C20orf202A1L168 122 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 E9PLD3 99 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 J3QQQ9 107 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 LGALS3P17931 250 aaKnown RBP3.68□□□□□ -1.82
DDB1-210ENST00000538129 NMUP48645 174 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 HIST1H2BLQ99880 126 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 NDUFA12Q9UI09 145 aa3.68□□□□□ -1.82
DDB1-210ENST00000538129 LINC00158P58513 81 aa3.67□□□□□ -1.82
DDB1-210ENST00000538129 PHF5AQ7RTV0 110 aaKnown RBP3.67□□□□□ -1.82
DDB1-210ENST00000538129 FAM19A5Q7Z5A7 132 aaPredicted RBP3.67□□□□□ -1.82
DDB1-210ENST00000538129 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
DDB1-210ENST00000538129 SND1-IT1Q9HBX3 110 aa3.67□□□□□ -1.82
DDB1-210ENST00000538129 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
DDB1-210ENST00000538129 C22orf24Q9Y442 160 aa3.67□□□□□ -1.82
DDB1-210ENST00000538129 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
DDB1-210ENST00000538129 M0QXV9 152 aa3.66□□□□□ -1.82
DDB1-210ENST00000538129 SMIM13P0DJ93 91 aa3.66□□□□□ -1.82
DDB1-210ENST00000538129 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
DDB1-210ENST00000538129 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
DDB1-210ENST00000538129 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
DDB1-210ENST00000538129 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 UBE2BP63146 152 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.83
DDB1-210ENST00000538129 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 MIR7-3HGQ8N6C7 128 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 PSORS1C2Q9UIG4 136 aa3.65□□□□□ -1.83
DDB1-210ENST00000538129 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.83
DDB1-210ENST00000538129 IGKV2D-26A0A0A0MRZ7 120 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms