RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 C9orf129Q5T035 196 aaKnown RBP11.18□□□□□ -0.62
CCDC61-201ENST00000536603 PHF5AQ7RTV0 110 aaKnown RBP11.18□□□□□ -0.62
CCDC61-201ENST00000536603 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
CCDC61-201ENST00000536603 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
CCDC61-201ENST00000536603 PKHD1L1Q86WI1 4243 aa11.17□□□□□ -0.62
CCDC61-201ENST00000536603 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
CCDC61-201ENST00000536603 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
CCDC61-201ENST00000536603 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
CCDC61-201ENST00000536603 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
CCDC61-201ENST00000536603 PCP2Q8IVA1 136 aa11.15□□□□□ -0.62
CCDC61-201ENST00000536603 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
CCDC61-201ENST00000536603 NMUP48645 174 aa11.14□□□□□ -0.63
CCDC61-201ENST00000536603 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
CCDC61-201ENST00000536603 PAM16Q9Y3D7 125 aa11.12□□□□□ -0.63
CCDC61-201ENST00000536603 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
CCDC61-201ENST00000536603 M0QXV9 152 aa11.11□□□□□ -0.63
CCDC61-201ENST00000536603 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
CCDC61-201ENST00000536603 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
CCDC61-201ENST00000536603 PFN2P35080 140 aa11.1□□□□□ -0.63
CCDC61-201ENST00000536603 SPATA45Q537H7 98 aa11.1□□□□□ -0.63
CCDC61-201ENST00000536603 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
CCDC61-201ENST00000536603 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
CCDC61-201ENST00000536603 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
CCDC61-201ENST00000536603 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
CCDC61-201ENST00000536603 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
CCDC61-201ENST00000536603 HERV-K104P63124 156 aa11.08□□□□□ -0.64
CCDC61-201ENST00000536603 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
CCDC61-201ENST00000536603 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
CCDC61-201ENST00000536603 SMIM13P0DJ93 91 aa11.07□□□□□ -0.64
CCDC61-201ENST00000536603 UBE2BP63146 152 aa11.07□□□□□ -0.64
CCDC61-201ENST00000536603 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
CCDC61-201ENST00000536603 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
CCDC61-201ENST00000536603 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
CCDC61-201ENST00000536603 SMIM6P0DI80 62 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 COX8AP10176 69 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 COX17Q14061 63 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 LITAFQ99732 161 aa11.05□□□□□ -0.64
CCDC61-201ENST00000536603 LINC00158P58513 81 aa11.04□□□□□ -0.64
CCDC61-201ENST00000536603 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
CCDC61-201ENST00000536603 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC61-201ENST00000536603 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
CCDC61-201ENST00000536603 DAND5Q8N907 189 aa11.03□□□□□ -0.64
CCDC61-201ENST00000536603 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
CCDC61-201ENST00000536603 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
CCDC61-201ENST00000536603 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
CCDC61-201ENST00000536603 MIR7-3HGQ8N6C7 128 aa11.01□□□□□ -0.65
CCDC61-201ENST00000536603 DLEU1O43261 78 aa10.99□□□□□ -0.65
CCDC61-201ENST00000536603 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
CCDC61-201ENST00000536603 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
CCDC61-201ENST00000536603 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
CCDC61-201ENST00000536603 Q8NDZ9 215 aa10.99□□□□□ -0.65
CCDC61-201ENST00000536603 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 TIMM17BO60830 172 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 S100A12P80511 92 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
CCDC61-201ENST00000536603 GAGE10A6NGK3 116 aa10.97□□□□□ -0.65
CCDC61-201ENST00000536603 SLC25A34Q6PIV7 304 aa10.97□□□□□ -0.65
CCDC61-201ENST00000536603 C12orf57Q99622 126 aa10.97□□□□□ -0.65
CCDC61-201ENST00000536603 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
CCDC61-201ENST00000536603 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.65
CCDC61-201ENST00000536603 LINC01600Q96MT4 127 aa10.96□□□□□ -0.65
CCDC61-201ENST00000536603 NPC2P61916 151 aa10.95□□□□□ -0.66
CCDC61-201ENST00000536603 LINC00518Q8N0U6 118 aa10.95□□□□□ -0.66
CCDC61-201ENST00000536603 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
CCDC61-201ENST00000536603 VPREB1P12018 145 aa10.94□□□□□ -0.66
CCDC61-201ENST00000536603 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
CCDC61-201ENST00000536603 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
CCDC61-201ENST00000536603 RNF213Q63HN8 5207 aa10.93□□□□□ -0.66
CCDC61-201ENST00000536603 LOC107984156A0A0G2JMH3 177 aa10.93□□□□□ -0.66
CCDC61-201ENST00000536603 ARL17AQ8IVW1 177 aa10.93□□□□□ -0.66
CCDC61-201ENST00000536603 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
CCDC61-201ENST00000536603 SPANXCQ9NY87 97 aa10.93□□□□□ -0.66
CCDC61-201ENST00000536603 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
CCDC61-201ENST00000536603 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
CCDC61-201ENST00000536603 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
CCDC61-201ENST00000536603 IGKV2-28A0A075B6P5 120 aa10.9□□□□□ -0.66
CCDC61-201ENST00000536603 IGKV2D-28P01615 120 aa10.9□□□□□ -0.66
CCDC61-201ENST00000536603 SPANXB1Q9NS25 103 aaPredicted RBP10.9□□□□□ -0.66
CCDC61-201ENST00000536603 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
CCDC61-201ENST00000536603 LRP2P98164 4655 aa10.9□□□□□ -0.66
CCDC61-201ENST00000536603 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
CCDC61-201ENST00000536603 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
CCDC61-201ENST00000536603 ZNF861PO60384 105 aa10.88□□□□□ -0.67
CCDC61-201ENST00000536603 BCE1O60756 84 aa10.88□□□□□ -0.67
CCDC61-201ENST00000536603 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
CCDC61-201ENST00000536603 H0Y9J4 135 aa10.87□□□□□ -0.67
CCDC61-201ENST00000536603 TNXBP22105 4242 aa10.86□□□□□ -0.67
CCDC61-201ENST00000536603 Q6ZVH6 145 aa10.86□□□□□ -0.67
CCDC61-201ENST00000536603 MIEN1Q9BRT3 115 aa10.86□□□□□ -0.67
CCDC61-201ENST00000536603 M0R378 163 aa10.84□□□□□ -0.67
CCDC61-201ENST00000536603 IFITM1P13164 125 aa10.84□□□□□ -0.67
CCDC61-201ENST00000536603 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
CCDC61-201ENST00000536603 NCR3O14931 201 aa10.83□□□□□ -0.68
CCDC61-201ENST00000536603 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
CCDC61-201ENST00000536603 KRTAP10-8P60410 259 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms