RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
VPS33B-202ENST00000535906 UNQ6190/PRO20217Q6UXQ8 127 aa9.01□□□□□ -0.97
VPS33B-202ENST00000535906 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
VPS33B-202ENST00000535906 ESRGQ1W209 222 aa9□□□□□ -0.97
VPS33B-202ENST00000535906 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
VPS33B-202ENST00000535906 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
VPS33B-202ENST00000535906 PRB2P02812 416 aaPredicted RBP9□□□□□ -0.97
VPS33B-202ENST00000535906 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
VPS33B-202ENST00000535906 C9orf129Q5T035 196 aaKnown RBP8.99□□□□□ -0.97
VPS33B-202ENST00000535906 C11orf45Q8TAV5 145 aa8.99□□□□□ -0.97
VPS33B-202ENST00000535906 DEFB131BA0A096LNP1 70 aa8.99□□□□□ -0.97
VPS33B-202ENST00000535906 TMEM126AQ9H061 195 aa8.99□□□□□ -0.97
VPS33B-202ENST00000535906 A0A1B0GX51 115 aa8.98□□□□□ -0.97
VPS33B-202ENST00000535906 Q8NDZ9 215 aa8.98□□□□□ -0.97
VPS33B-202ENST00000535906 SVIPQ8NHG7 77 aa8.97□□□□□ -0.97
VPS33B-202ENST00000535906 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
VPS33B-202ENST00000535906 SLPIP03973 132 aa8.97□□□□□ -0.97
VPS33B-202ENST00000535906 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
VPS33B-202ENST00000535906 C14orf132Q9NPU4 83 aa8.97□□□□□ -0.97
VPS33B-202ENST00000535906 MUC7Q8TAX7 377 aa8.96□□□□□ -0.97
VPS33B-202ENST00000535906 KRTAP26-1Q6PEX3 210 aa8.95□□□□□ -0.98
VPS33B-202ENST00000535906 Q8N814 137 aa8.95□□□□□ -0.98
VPS33B-202ENST00000535906 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
VPS33B-202ENST00000535906 NCR3O14931 201 aa8.94□□□□□ -0.98
VPS33B-202ENST00000535906 C6orf48Q9UBA6 75 aa8.93□□□□□ -0.98
VPS33B-202ENST00000535906 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
VPS33B-202ENST00000535906 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
VPS33B-202ENST00000535906 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
VPS33B-202ENST00000535906 B5MCH6 92 aa8.92□□□□□ -0.98
VPS33B-202ENST00000535906 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
VPS33B-202ENST00000535906 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 LINC01556Q5JQF7 62 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 MRAPQ8TCY5 172 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 K7EIL1 84 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
VPS33B-202ENST00000535906 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
VPS33B-202ENST00000535906 TM2D3Q9BRN9 247 aa8.9□□□□□ -0.98
VPS33B-202ENST00000535906 JMJD7-PLA2G4BH0Y9G9 81 aa8.9□□□□□ -0.99
VPS33B-202ENST00000535906 C15orf56Q8N910 161 aa8.9□□□□□ -0.99
VPS33B-202ENST00000535906 HUWE1Q7Z6Z7 4374 aaKnown RBP8.89□□□□□ -0.99
VPS33B-202ENST00000535906 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
VPS33B-202ENST00000535906 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
VPS33B-202ENST00000535906 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
VPS33B-202ENST00000535906 MGAM2Q2M2H8 2515 aa8.88□□□□□ -0.99
VPS33B-202ENST00000535906 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
VPS33B-202ENST00000535906 CCKP06307 115 aa8.88□□□□□ -0.99
VPS33B-202ENST00000535906 LINC00575Q6W349 94 aa8.88□□□□□ -0.99
VPS33B-202ENST00000535906 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
VPS33B-202ENST00000535906 TRAV10A0A0B4J240 114 aa8.87□□□□□ -0.99
VPS33B-202ENST00000535906 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
VPS33B-202ENST00000535906 RPL18AQ02543 176 aaKnown RBP8.87□□□□□ -0.99
VPS33B-202ENST00000535906 Q6ZRU5 148 aa8.86□□□□□ -0.99
VPS33B-202ENST00000535906 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
VPS33B-202ENST00000535906 Q6JHZ5 121 aa8.86□□□□□ -0.99
VPS33B-202ENST00000535906 SS18L2Q9UHA2 77 aa8.86□□□□□ -0.99
VPS33B-202ENST00000535906 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
VPS33B-202ENST00000535906 hADV29S1A0JD25 119 aa8.84□□□□□ -0.99
VPS33B-202ENST00000535906 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
VPS33B-202ENST00000535906 C2orf48Q96LS8 159 aa8.83□□□□□ -1
VPS33B-202ENST00000535906 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
VPS33B-202ENST00000535906 TRBV10-3A0A0K0K1G6 114 aa8.82□□□□□ -1
VPS33B-202ENST00000535906 COL7A1Q02388 2944 aa8.81□□□□□ -1
VPS33B-202ENST00000535906 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
VPS33B-202ENST00000535906 TRAV23DV6A0A075B6W5 121 aa8.8□□□□□ -1
VPS33B-202ENST00000535906 VPREB1P12018 145 aa8.8□□□□□ -1
VPS33B-202ENST00000535906 Q6ZRP5 223 aa8.79□□□□□ -1
VPS33B-202ENST00000535906 C3orf22Q8N5N4 141 aa8.79□□□□□ -1
VPS33B-202ENST00000535906 ATOX1O00244 68 aa8.79□□□□□ -1
VPS33B-202ENST00000535906 UQCRQO14949 82 aa8.79□□□□□ -1
VPS33B-202ENST00000535906 DIRC1Q969H9 104 aa8.79□□□□□ -1
VPS33B-202ENST00000535906 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
VPS33B-202ENST00000535906 SYCNQ0VAF6 134 aa8.78□□□□□ -1
VPS33B-202ENST00000535906 DNAH1Q9P2D7 4330 aa8.78□□□□□ -1
VPS33B-202ENST00000535906 H3BQ85 93 aa8.78□□□□□ -1
VPS33B-202ENST00000535906 CASC10Q5T4H9 136 aa8.77□□□□□ -1.01
VPS33B-202ENST00000535906 Q6ZQY7 126 aa8.77□□□□□ -1.01
VPS33B-202ENST00000535906 STAB2Q8WWQ8 2551 aa8.77□□□□□ -1.01
VPS33B-202ENST00000535906 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-202ENST00000535906 ATP5EP2Q5VTU8 51 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 Q6ZQT0 140 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 MDFIQ99750 246 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 F8WDY8 70 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 LYSTQ99698 3801 aa8.76□□□□□ -1.01
VPS33B-202ENST00000535906 COX7CP15954 63 aa8.75□□□□□ -1.01
VPS33B-202ENST00000535906 A0A087WVE0 104 aa8.75□□□□□ -1.01
VPS33B-202ENST00000535906 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
VPS33B-202ENST00000535906 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
VPS33B-202ENST00000535906 M0R378 163 aa8.74□□□□□ -1.01
VPS33B-202ENST00000535906 COX7BP24311 80 aa8.74□□□□□ -1.01
VPS33B-202ENST00000535906 ELOF1P60002 83 aaKnown RBP8.74□□□□□ -1.01
VPS33B-202ENST00000535906 UBL5Q9BZL1 73 aa8.74□□□□□ -1.01
VPS33B-202ENST00000535906 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
VPS33B-202ENST00000535906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
VPS33B-202ENST00000535906 UPK3BQ9BT76 320 aa8.73□□□□□ -1.01
VPS33B-202ENST00000535906 DNAH9Q9NYC9 4486 aa8.72□□□□□ -1.01
VPS33B-202ENST00000535906 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
VPS33B-202ENST00000535906 GHRHP01286 108 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms