RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 RAB5AP20339 215 aa5.23□□□□□ -1.57
CSDE1-215ENST00000533818 SEC11AP67812 179 aa5.23□□□□□ -1.57
CSDE1-215ENST00000533818 AMELXQ99217 191 aa5.23□□□□□ -1.57
CSDE1-215ENST00000533818 FXYD6-FXYD2A0A087WZ82 144 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 LINC00862A6NCI5 91 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 SMIM1B2RUZ4 78 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 ATP5LO75964 103 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 CKS2P33552 79 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
CSDE1-215ENST00000533818 SPRR1AP35321 89 aa5.21□□□□□ -1.58
CSDE1-215ENST00000533818 RIGQ13278 110 aa5.21□□□□□ -1.58
CSDE1-215ENST00000533818 FAM104BQ5XKR9 115 aa5.21□□□□□ -1.58
CSDE1-215ENST00000533818 CT83Q5H943 113 aa5.2□□□□□ -1.58
CSDE1-215ENST00000533818 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
CSDE1-215ENST00000533818 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
CSDE1-215ENST00000533818 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
CSDE1-215ENST00000533818 TRAV9-1A0A075B6T8 112 aa5.18□□□□□ -1.58
CSDE1-215ENST00000533818 LOC389332A0A1B0GUA5 103 aa5.18□□□□□ -1.58
CSDE1-215ENST00000533818 C6orf99Q4VX62 202 aa5.18□□□□□ -1.58
CSDE1-215ENST00000533818 KCNQ1DNQ9H478 68 aa5.18□□□□□ -1.58
CSDE1-215ENST00000533818 NPYP01303 97 aa5.17□□□□□ -1.58
CSDE1-215ENST00000533818 TAGLN2P37802 199 aaKnown RBP5.17□□□□□ -1.58
CSDE1-215ENST00000533818 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
CSDE1-215ENST00000533818 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
CSDE1-215ENST00000533818 B5MCH6 92 aa5.16□□□□□ -1.58
CSDE1-215ENST00000533818 H7C2G1 150 aa5.16□□□□□ -1.58
CSDE1-215ENST00000533818 ERG28Q9UKR5 140 aa5.16□□□□□ -1.58
CSDE1-215ENST00000533818 CYSLTR1Q9Y271 337 aa5.16□□□□□ -1.58
CSDE1-215ENST00000533818 D6R8Y8 96 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 SPINK8P0C7L1 97 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 COX17Q14061 63 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 C10orf91Q5T1B1 145 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 Q75L30 129 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 Q9BRP9 147 aa5.15□□□□□ -1.59
CSDE1-215ENST00000533818 A6NN06 94 aa5.14□□□□□ -1.59
CSDE1-215ENST00000533818 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-215ENST00000533818 IGIPA6NJ69 53 aa5.13□□□□□ -1.59
CSDE1-215ENST00000533818 SMIM29Q86T20 159 aa5.13□□□□□ -1.59
CSDE1-215ENST00000533818 TEX46H3BTG2 121 aa5.12□□□□□ -1.59
CSDE1-215ENST00000533818 ARPC5O15511 151 aa5.12□□□□□ -1.59
CSDE1-215ENST00000533818 CD164Q04900 197 aa5.12□□□□□ -1.59
CSDE1-215ENST00000533818 PAPPA-AS1Q5QFB9 102 aa5.12□□□□□ -1.59
CSDE1-215ENST00000533818 Q5XG85 94 aa5.12□□□□□ -1.59
CSDE1-215ENST00000533818 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-215ENST00000533818 IGLV5-45A0A087WSX0 123 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 NCR3O14931 201 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 SPRR2EP22531 72 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 SPRR2BP35325 72 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 SPRR2AP35326 72 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 S100A12P80511 92 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 IFITM3Q01628 133 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 Q6ZRX8 168 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 ST20-AS1Q8NBB2 130 aa5.1□□□□□ -1.59
CSDE1-215ENST00000533818 PPBPP02775 128 aa5.09□□□□□ -1.59
CSDE1-215ENST00000533818 Q1RN00 199 aa5.09□□□□□ -1.59
CSDE1-215ENST00000533818 Q6ZVH6 145 aa5.09□□□□□ -1.59
CSDE1-215ENST00000533818 HMSDA8MTL9 139 aa5.08□□□□□ -1.6
CSDE1-215ENST00000533818 OBSCN-AS1Q96MR7 158 aa5.08□□□□□ -1.6
CSDE1-215ENST00000533818 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CSDE1-215ENST00000533818 LINC00158P58513 81 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 ALKAL2Q6UX46 152 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 BOD1L2Q8IYS8 172 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 PRELID3AQ96N28 172 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 OSTCQ9NRP0 149 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 NAT8BQ9UHF3 227 aa5.07□□□□□ -1.6
CSDE1-215ENST00000533818 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 F8W036 122 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 H3BS24 57 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 SLC25A34Q6PIV7 304 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 TMEM136Q6ZRR5 245 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 ORMDL3Q8N138 153 aa5.06□□□□□ -1.6
CSDE1-215ENST00000533818 LOC107984156A0A0G2JMH3 177 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 A0A1B0GW15 77 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 H3BRM9 83 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 PCP2Q8IVA1 136 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 ARL17AQ8IVW1 177 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 S100ZQ8WXG8 99 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 PRO1933Q9H354 126 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 RBM12B-AS1Q9P1G2 102 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 LAMTOR3Q9UHA4 124 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 V9GYV3 84 aa5.05□□□□□ -1.6
CSDE1-215ENST00000533818 A0A0U1RRA0 63 aa5.04□□□□□ -1.6
CSDE1-215ENST00000533818 RPL23P62829 140 aaKnown RBP5.04□□□□□ -1.6
CSDE1-215ENST00000533818 JOSD1Q15040 202 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-215ENST00000533818 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
CSDE1-215ENST00000533818 ORMDL2Q53FV1 153 aa5.04□□□□□ -1.6
CSDE1-215ENST00000533818 IGLV5-39A0A0G2JS06 123 aa5.03□□□□□ -1.6
CSDE1-215ENST00000533818 C5orf52A6NGY3 159 aa5.03□□□□□ -1.6
CSDE1-215ENST00000533818 CEBPGP53567 150 aa5.03□□□□□ -1.6
CSDE1-215ENST00000533818 PMVKQ15126 192 aa5.03□□□□□ -1.6
CSDE1-215ENST00000533818 Q8N8P6 123 aa5.03□□□□□ -1.6
CSDE1-215ENST00000533818 TMEM250H0YL14 139 aa5.02□□□□□ -1.61
CSDE1-215ENST00000533818 SPRR1BP22528 89 aa5.02□□□□□ -1.61
CSDE1-215ENST00000533818 MAP1LC3AQ9H492 121 aa5.02□□□□□ -1.61
CSDE1-215ENST00000533818 A8MWP4 228 aa5.01□□□□□ -1.61
CSDE1-215ENST00000533818 S100A8P05109 93 aa5.01□□□□□ -1.61
CSDE1-215ENST00000533818 ATP6V1G1O75348 118 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms