RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TIMM17BO60830 172 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 SERTAD4-AS1Q5TG53 156 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 MIR7-3HGQ8N6C7 128 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
BRK1-201ENST00000530758 FAM19A5Q7Z5A7 132 aaPredicted RBP10□□□□□ -0.81
BRK1-201ENST00000530758 PCP2Q8IVA1 136 aa10□□□□□ -0.81
BRK1-201ENST00000530758 LITAFQ99732 161 aa10□□□□□ -0.81
BRK1-201ENST00000530758 C22orf24Q9Y442 160 aa10□□□□□ -0.81
BRK1-201ENST00000530758 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
BRK1-201ENST00000530758 KRTAP10-4P60372 401 aaPredicted RBP9.99□□□□□ -0.81
BRK1-201ENST00000530758 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
BRK1-201ENST00000530758 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
BRK1-201ENST00000530758 Q5VSD8 79 aa9.99□□□□□ -0.81
BRK1-201ENST00000530758 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
BRK1-201ENST00000530758 C7orf33Q8WU49 177 aa9.99□□□□□ -0.81
BRK1-201ENST00000530758 M0QXV9 152 aa9.98□□□□□ -0.81
BRK1-201ENST00000530758 VPREB1P12018 145 aa9.98□□□□□ -0.81
BRK1-201ENST00000530758 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
BRK1-201ENST00000530758 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
BRK1-201ENST00000530758 MYCBP2O75592 4640 aa9.96□□□□□ -0.81
BRK1-201ENST00000530758 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.82
BRK1-201ENST00000530758 Q8NDZ9 215 aa9.96□□□□□ -0.82
BRK1-201ENST00000530758 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
BRK1-201ENST00000530758 DAND5Q8N907 189 aa9.95□□□□□ -0.82
BRK1-201ENST00000530758 DLEU1O43261 78 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
BRK1-201ENST00000530758 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 SPANXCQ9NY87 97 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 HERC1Q15751 4861 aa9.94□□□□□ -0.82
BRK1-201ENST00000530758 NDUFC2O95298 119 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 COX8AP10176 69 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 SCGB1D4Q6XE38 83 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 Q6ZVH6 145 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 VAMP8Q9BV40 100 aa9.93□□□□□ -0.82
BRK1-201ENST00000530758 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
BRK1-201ENST00000530758 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
BRK1-201ENST00000530758 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
BRK1-201ENST00000530758 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
BRK1-201ENST00000530758 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
BRK1-201ENST00000530758 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
BRK1-201ENST00000530758 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
BRK1-201ENST00000530758 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
BRK1-201ENST00000530758 M0R378 163 aa9.9□□□□□ -0.82
BRK1-201ENST00000530758 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
BRK1-201ENST00000530758 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
BRK1-201ENST00000530758 FLG2Q5D862 2391 aaPredicted RBP9.9□□□□□ -0.82
BRK1-201ENST00000530758 PKHD1L1Q86WI1 4243 aa9.89□□□□□ -0.83
BRK1-201ENST00000530758 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
BRK1-201ENST00000530758 TRBV10-2A0A0K0K1G8 114 aa9.89□□□□□ -0.83
BRK1-201ENST00000530758 IFITM1P13164 125 aa9.89□□□□□ -0.83
BRK1-201ENST00000530758 UBE2BP63146 152 aa9.89□□□□□ -0.83
BRK1-201ENST00000530758 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
BRK1-201ENST00000530758 COPS9Q8WXC6 57 aa9.87□□□□□ -0.83
BRK1-201ENST00000530758 NPC2P61916 151 aa9.86□□□□□ -0.83
BRK1-201ENST00000530758 SRSF9Q13242 221 aaKnown RBP eCLIP9.86□□□□□ -0.83
BRK1-201ENST00000530758 C14orf144Q96I85 54 aa9.86□□□□□ -0.83
BRK1-201ENST00000530758 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
BRK1-201ENST00000530758 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
BRK1-201ENST00000530758 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
BRK1-201ENST00000530758 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
BRK1-201ENST00000530758 SLC25A34Q6PIV7 304 aa9.84□□□□□ -0.83
BRK1-201ENST00000530758 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
BRK1-201ENST00000530758 HIGD1BQ9P298 99 aa9.84□□□□□ -0.83
BRK1-201ENST00000530758 DMBT1Q9UGM3 2413 aaPredicted RBP9.83□□□□□ -0.84
BRK1-201ENST00000530758 IGLV7-43P04211 117 aa9.83□□□□□ -0.84
BRK1-201ENST00000530758 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
BRK1-201ENST00000530758 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 NCR3O14931 201 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 LINC00518Q8N0U6 118 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
BRK1-201ENST00000530758 BCE1O60756 84 aa9.81□□□□□ -0.84
BRK1-201ENST00000530758 S100A12P80511 92 aa9.81□□□□□ -0.84
BRK1-201ENST00000530758 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
BRK1-201ENST00000530758 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
BRK1-201ENST00000530758 SMIM6P0DI80 62 aa9.8□□□□□ -0.84
BRK1-201ENST00000530758 C2orf91Q6ZV80 131 aa9.8□□□□□ -0.84
BRK1-201ENST00000530758 TMEM126AQ9H061 195 aa9.8□□□□□ -0.84
BRK1-201ENST00000530758 LRP1Q07954 4544 aaKnown RBP9.79□□□□□ -0.84
BRK1-201ENST00000530758 PRYO14603 147 aa9.79□□□□□ -0.84
BRK1-201ENST00000530758 DDTP30046 118 aa9.79□□□□□ -0.84
BRK1-201ENST00000530758 SPRR1AP35321 89 aa9.79□□□□□ -0.84
BRK1-201ENST00000530758 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
BRK1-201ENST00000530758 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
BRK1-201ENST00000530758 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
BRK1-201ENST00000530758 ZNF861PO60384 105 aa9.77□□□□□ -0.85
BRK1-201ENST00000530758 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
BRK1-201ENST00000530758 TAL2Q16559 108 aa9.76□□□□□ -0.85
BRK1-201ENST00000530758 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
BRK1-201ENST00000530758 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
BRK1-201ENST00000530758 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
BRK1-201ENST00000530758 H0Y9J4 135 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms