RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	MAP1LC3C	Q9BXW4	147 aa		4.89	□□□□□ -1.63
MS4A6A-208	ENST00000528851		A0A1B0GV90	55 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851	SFTA2	Q6UW10	78 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851	PRO1933	Q9H354	126 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851	TMEM223	A0PJW6	202 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851	INAFM2	P0DMQ5	153 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851	C7orf33	Q8WU49	177 aa		4.88	□□□□□ -1.63
MS4A6A-208	ENST00000528851		A0A1W2PNN7	141 aa		4.87	□□□□□ -1.63
MS4A6A-208	ENST00000528851		M0R143	59 aa		4.87	□□□□□ -1.63
MS4A6A-208	ENST00000528851	GAGE2E	Q4V326	116 aa		4.87	□□□□□ -1.63
MS4A6A-208	ENST00000528851	C9orf116	Q5BN46	136 aa	Predicted RBP	4.87	□□□□□ -1.63
MS4A6A-208	ENST00000528851	GAGE2D	Q9UEU5	116 aa		4.87	□□□□□ -1.63
MS4A6A-208	ENST00000528851	PLN	P26678	52 aa		4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851	RPL37A	P61513	92 aa	Known RBP	4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851		H0Y8G0	127 aa		4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851	DPM2	O94777	84 aa		4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851	COX17	Q14061	63 aa		4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851	PET117	Q6UWS5	81 aa		4.86	□□□□□ -1.63
MS4A6A-208	ENST00000528851	SYS1-DBNDD2	H3BUS1	97 aa		4.85	□□□□□ -1.63
MS4A6A-208	ENST00000528851	IGKC	P01834	107 aa		4.85	□□□□□ -1.63
MS4A6A-208	ENST00000528851	KRTAP10-4	P60372	401 aa	Predicted RBP	4.85	□□□□□ -1.63
MS4A6A-208	ENST00000528851	SNHG12	Q9BXW3	62 aa		4.85	□□□□□ -1.63
MS4A6A-208	ENST00000528851	SCGB1D1	O95968	90 aa		4.84	□□□□□ -1.63
MS4A6A-208	ENST00000528851	HERV-K104	P63124	156 aa		4.84	□□□□□ -1.63
MS4A6A-208	ENST00000528851	C9orf129	Q5T035	196 aa	Known RBP	4.84	□□□□□ -1.63
MS4A6A-208	ENST00000528851	MIEN1	Q9BRT3	115 aa		4.84	□□□□□ -1.63
MS4A6A-208	ENST00000528851	PLA2G2D	Q9UNK4	145 aa		4.84	□□□□□ -1.63
MS4A6A-208	ENST00000528851	LEPROT	O15243	131 aa		4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	HERVK_113	P61574	105 aa		4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PLEKHB2	Q96CS7	222 aa		4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	ZNF625	Q96I27	306 aa	Predicted RBP	4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	ERG28	Q9UKR5	140 aa		4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	LINC01545	Q5VT33	79 aa		4.83	□□□□□ -1.64
MS4A6A-208	ENST00000528851	MYMX	A0A1B0GTQ4	84 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	FAM168B	A1KXE4	195 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	C3orf79	P0CE67	100 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PFN2	P35080	140 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PHF5A	Q7RTV0	110 aa	Known RBP	4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	KRTAP7-1	Q8IUC3	87 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PMCHL2	Q9BQD1	86 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	XAGE1A	Q9HD64	81 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	TP73-AS1	Q9UF72	201 aa		4.82	□□□□□ -1.64
MS4A6A-208	ENST00000528851	NMU	P48645	174 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	VAMP8	Q9BV40	100 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	NDUFA12	Q9UI09	145 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	C22orf24	Q9Y442	160 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	FAT1	Q14517	4588 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	C20orf202	A1L168	122 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851		E9PLD3	99 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	DLEU1	O43261	78 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	LINC00158	P58513	81 aa		4.81	□□□□□ -1.64
MS4A6A-208	ENST00000528851	VPS13B	Q7Z7G8	4022 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	IGLV5-37	A0A075B6J1	123 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851		J3QQQ9	107 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851		M0QXV9	152 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	KRTDAP	P60985	99 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PRR3	P79522	188 aa	Known RBP	4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	RPL24	P83731	157 aa	Known RBP	4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	COL5A1-AS1	Q5SY13	56 aa		4.8	□□□□□ -1.64
MS4A6A-208	ENST00000528851	LGALS3	P17931	250 aa	Known RBP	4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	MEIG1	Q5JSS6	88 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	SERTAD4-AS1	Q5TG53	156 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	SND1-IT1	Q9HBX3	110 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	UQCR10	Q9UDW1	63 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	PSORS1C2	Q9UIG4	136 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	UBE2B	P63146	152 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	SPINK6	Q6UWN8	80 aa		4.79	□□□□□ -1.64
MS4A6A-208	ENST00000528851	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	OXT	P01178	125 aa		4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	SMIM13	P0DJ93	91 aa		4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	C1orf137	Q5JT78	98 aa		4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	MRPL55	Q7Z7F7	128 aa	Known RBP	4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	ABCA13	Q86UQ4	5058 aa		4.78	□□□□□ -1.64
MS4A6A-208	ENST00000528851	LOC107984156	A0A0G2JMH3	177 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851		A0A0U1RRA0	63 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	HNRNPA3	P51991	378 aa	Known RBP	4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	TSPEAR-AS2	P59090	65 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	ARL17A	Q8IVW1	177 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	NKAPP1	Q8N9T2	125 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	LINC00167	Q96N53	147 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	PAM16	Q9Y3D7	125 aa		4.77	□□□□□ -1.65
MS4A6A-208	ENST00000528851	IGLV7-43	P04211	117 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851	VPREB1	P12018	145 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851	KRTAP11-1	Q8IUC1	163 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851	MIR7-3HG	Q8N6C7	128 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851	SPATA45	Q537H7	98 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851	CBY1	Q9Y3M2	126 aa		4.76	□□□□□ -1.65
MS4A6A-208	ENST00000528851		A0A0J9YXY3	114 aa		4.75	□□□□□ -1.65
MS4A6A-208	ENST00000528851	CDIP1	Q9H305	208 aa		4.75	□□□□□ -1.65
MS4A6A-208	ENST00000528851	IGLV1-50	A0A075B6I6	118 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851		M0R378	163 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851	TIMM17B	O60830	172 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851	IGKV2D-26	A0A0A0MRZ7	120 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851	REG3G	Q6UW15	175 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851	BOD1L2	Q8IYS8	172 aa		4.74	□□□□□ -1.65
MS4A6A-208	ENST00000528851	PCLO	Q9Y6V0	5065 aa		4.73	□□□□□ -1.65
MS4A6A-208	ENST00000528851	GAGE10	A6NGK3	116 aa		4.73	□□□□□ -1.65
MS4A6A-208	ENST00000528851	RPL37AP8	A6NKH3	93 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms