RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
USF1-208ENST00000528768 KLK12Q9UKR0 248 aa7.99□□□□□ -1.13
USF1-208ENST00000528768 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
USF1-208ENST00000528768 C11orf45Q8TAV5 145 aa7.98□□□□□ -1.13
USF1-208ENST00000528768 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
USF1-208ENST00000528768 NDUFC2O95298 119 aa7.97□□□□□ -1.13
USF1-208ENST00000528768 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
USF1-208ENST00000528768 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
USF1-208ENST00000528768 NTN5Q8WTR8 489 aaPredicted RBP7.97□□□□□ -1.13
USF1-208ENST00000528768 DEFB131BA0A096LNP1 70 aa7.96□□□□□ -1.14
USF1-208ENST00000528768 SNCGO76070 127 aa7.96□□□□□ -1.14
USF1-208ENST00000528768 SCGB1A1P11684 91 aa7.96□□□□□ -1.14
USF1-208ENST00000528768 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
USF1-208ENST00000528768 Q6ZTC4 211 aa7.96□□□□□ -1.14
USF1-208ENST00000528768 A0A0J9YWU9 116 aa7.95□□□□□ -1.14
USF1-208ENST00000528768 DNAL4O96015 105 aa7.95□□□□□ -1.14
USF1-208ENST00000528768 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
USF1-208ENST00000528768 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
USF1-208ENST00000528768 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
USF1-208ENST00000528768 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
USF1-208ENST00000528768 TRAV10A0A0B4J240 114 aa7.93□□□□□ -1.14
USF1-208ENST00000528768 F8WDY8 70 aa7.93□□□□□ -1.14
USF1-208ENST00000528768 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
USF1-208ENST00000528768 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
USF1-208ENST00000528768 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
USF1-208ENST00000528768 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
USF1-208ENST00000528768 GVQW2A0A096LPI5 108 aaPredicted RBP7.92□□□□□ -1.14
USF1-208ENST00000528768 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
USF1-208ENST00000528768 A0A1B0GVY2 172 aa7.91□□□□□ -1.14
USF1-208ENST00000528768 A0A1B0GX51 115 aa7.91□□□□□ -1.14
USF1-208ENST00000528768 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
USF1-208ENST00000528768 BAALC-AS2P0C853 105 aa7.91□□□□□ -1.14
USF1-208ENST00000528768 NANOS2P60321 138 aaKnown RBP7.91□□□□□ -1.14
USF1-208ENST00000528768 Q8N3U1 123 aa7.91□□□□□ -1.14
USF1-208ENST00000528768 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
USF1-208ENST00000528768 LINC01556Q5JQF7 62 aa7.9□□□□□ -1.14
USF1-208ENST00000528768 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
USF1-208ENST00000528768 TEX49A0A1B0GTD5 131 aa7.89□□□□□ -1.15
USF1-208ENST00000528768 ACYP1P07311 99 aa7.89□□□□□ -1.15
USF1-208ENST00000528768 ESRGQ1W209 222 aa7.89□□□□□ -1.15
USF1-208ENST00000528768 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
USF1-208ENST00000528768 WFDC10BQ8IUB3 73 aa7.89□□□□□ -1.15
USF1-208ENST00000528768 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
USF1-208ENST00000528768 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
USF1-208ENST00000528768 DNAH6Q9C0G6 4158 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 RMI2Q96E14 147 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 C2orf48Q96LS8 159 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
USF1-208ENST00000528768 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
USF1-208ENST00000528768 H3BQ85 93 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 LECT2O14960 151 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 DNAH10OSP0CZ25 163 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
USF1-208ENST00000528768 C6orf223Q8N319 242 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 FAM218AQ96MZ4 157 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 ORMDL1Q9P0S3 153 aa7.84□□□□□ -1.15
USF1-208ENST00000528768 IGKV2D-24A0A075B6R9 120 aa7.83□□□□□ -1.16
USF1-208ENST00000528768 GHRHP01286 108 aa7.83□□□□□ -1.16
USF1-208ENST00000528768 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
USF1-208ENST00000528768 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
USF1-208ENST00000528768 FAT2Q9NYQ8 4349 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 A0A087WYN8 130 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 NCR3O14931 201 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 Q9HAA7 133 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 C6orf48Q9UBA6 75 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
USF1-208ENST00000528768 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
USF1-208ENST00000528768 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
USF1-208ENST00000528768 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
USF1-208ENST00000528768 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
USF1-208ENST00000528768 XGP55808 180 aa7.8□□□□□ -1.16
USF1-208ENST00000528768 LINC00526Q96FQ7 95 aa7.8□□□□□ -1.16
USF1-208ENST00000528768 DNAH2Q9P225 4427 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 MT-ATP8P03928 68 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
USF1-208ENST00000528768 Q8N814 137 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
USF1-208ENST00000528768 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
USF1-208ENST00000528768 RTL8CO15255 209 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
USF1-208ENST00000528768 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 C6orf99Q4VX62 202 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 C15orf56Q8N910 161 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
USF1-208ENST00000528768 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
USF1-208ENST00000528768 M0R378 163 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 Q6Q795 121 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 Q6ZRU5 148 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 DIRC1Q969H9 104 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms