RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 A0A087WYN8 130 aa11.57□□□□□ -0.56
PCDHA6-202ENST00000527624 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
PCDHA6-202ENST00000527624 HIGD2BQ4VC39 106 aa11.56□□□□□ -0.56
PCDHA6-202ENST00000527624 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
PCDHA6-202ENST00000527624 ACYP1P07311 99 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 Q6Q795 121 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 STAB2Q8WWQ8 2551 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 DNAL4O96015 105 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 C1orf43Q9BWL3 253 aa11.55□□□□□ -0.56
PCDHA6-202ENST00000527624 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
PCDHA6-202ENST00000527624 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
PCDHA6-202ENST00000527624 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
PCDHA6-202ENST00000527624 NDUFC2O95298 119 aa11.52□□□□□ -0.57
PCDHA6-202ENST00000527624 C6orf48Q9UBA6 75 aa11.52□□□□□ -0.57
PCDHA6-202ENST00000527624 COL7A1Q02388 2944 aa11.52□□□□□ -0.57
PCDHA6-202ENST00000527624 C15orf56Q8N910 161 aa11.51□□□□□ -0.57
PCDHA6-202ENST00000527624 Q8NDZ9 215 aa11.51□□□□□ -0.57
PCDHA6-202ENST00000527624 LECT2O14960 151 aa11.51□□□□□ -0.57
PCDHA6-202ENST00000527624 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
PCDHA6-202ENST00000527624 ANAPC13Q9BS18 74 aa11.51□□□□□ -0.57
PCDHA6-202ENST00000527624 CAMK2N2Q96S95 79 aa11.49□□□□□ -0.57
PCDHA6-202ENST00000527624 NCR3O14931 201 aa11.48□□□□□ -0.57
PCDHA6-202ENST00000527624 NDUFV3P56181 108 aaKnown RBP11.48□□□□□ -0.57
PCDHA6-202ENST00000527624 KRTAP21-3Q3LHN1 58 aa11.48□□□□□ -0.57
PCDHA6-202ENST00000527624 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
PCDHA6-202ENST00000527624 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
PCDHA6-202ENST00000527624 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
PCDHA6-202ENST00000527624 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.57
PCDHA6-202ENST00000527624 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.57
PCDHA6-202ENST00000527624 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.57
PCDHA6-202ENST00000527624 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.57
PCDHA6-202ENST00000527624 Q6ZRU5 148 aa11.45□□□□□ -0.58
PCDHA6-202ENST00000527624 OBSCN-AS1Q96MR7 158 aa11.45□□□□□ -0.58
PCDHA6-202ENST00000527624 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
PCDHA6-202ENST00000527624 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
PCDHA6-202ENST00000527624 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
PCDHA6-202ENST00000527624 SLPIP03973 132 aa11.44□□□□□ -0.58
PCDHA6-202ENST00000527624 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
PCDHA6-202ENST00000527624 DNHD1Q96M86 4753 aa11.44□□□□□ -0.58
PCDHA6-202ENST00000527624 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
PCDHA6-202ENST00000527624 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
PCDHA6-202ENST00000527624 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
PCDHA6-202ENST00000527624 A0A1B0GX51 115 aa11.42□□□□□ -0.58
PCDHA6-202ENST00000527624 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
PCDHA6-202ENST00000527624 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
PCDHA6-202ENST00000527624 C14orf132Q9NPU4 83 aa11.41□□□□□ -0.58
PCDHA6-202ENST00000527624 CASC10Q5T4H9 136 aa11.41□□□□□ -0.58
PCDHA6-202ENST00000527624 IMUPQ9GZP8 106 aa11.41□□□□□ -0.58
PCDHA6-202ENST00000527624 RPL18AQ02543 176 aaKnown RBP11.4□□□□□ -0.58
PCDHA6-202ENST00000527624 S100A7L2Q5SY68 101 aa11.4□□□□□ -0.58
PCDHA6-202ENST00000527624 Q8N814 137 aa11.4□□□□□ -0.58
PCDHA6-202ENST00000527624 UPK3BQ9BT76 320 aa11.4□□□□□ -0.58
PCDHA6-202ENST00000527624 C6orf99Q4VX62 202 aa11.38□□□□□ -0.59
PCDHA6-202ENST00000527624 SYCNQ0VAF6 134 aa11.37□□□□□ -0.59
PCDHA6-202ENST00000527624 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
PCDHA6-202ENST00000527624 USP17L23D6RBM5 183 aa11.36□□□□□ -0.59
PCDHA6-202ENST00000527624 LYSTQ99698 3801 aa11.35□□□□□ -0.59
PCDHA6-202ENST00000527624 Q6ZRP5 223 aa11.35□□□□□ -0.59
PCDHA6-202ENST00000527624 TMEM256-PLSCR3K7ERE1 68 aa11.34□□□□□ -0.59
PCDHA6-202ENST00000527624 IGLV6-57P01721 117 aa11.33□□□□□ -0.59
PCDHA6-202ENST00000527624 RMI2Q96E14 147 aa11.33□□□□□ -0.59
PCDHA6-202ENST00000527624 APLNQ9ULZ1 77 aa11.33□□□□□ -0.59
PCDHA6-202ENST00000527624 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
PCDHA6-202ENST00000527624 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
PCDHA6-202ENST00000527624 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
PCDHA6-202ENST00000527624 LINC00575Q6W349 94 aa11.32□□□□□ -0.6
PCDHA6-202ENST00000527624 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
PCDHA6-202ENST00000527624 F8WDY8 70 aa11.32□□□□□ -0.6
PCDHA6-202ENST00000527624 JMJD7-PLA2G4BH0Y9G9 81 aa11.31□□□□□ -0.6
PCDHA6-202ENST00000527624 VPREB1P12018 145 aa11.31□□□□□ -0.6
PCDHA6-202ENST00000527624 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
PCDHA6-202ENST00000527624 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
PCDHA6-202ENST00000527624 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
PCDHA6-202ENST00000527624 CCDC179H3BU77 68 aa11.3□□□□□ -0.6
PCDHA6-202ENST00000527624 CCKP06307 115 aa11.29□□□□□ -0.6
PCDHA6-202ENST00000527624 TENM2Q9NT68 2774 aa11.29□□□□□ -0.6
PCDHA6-202ENST00000527624 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
PCDHA6-202ENST00000527624 hADV29S1A0JD25 119 aa11.28□□□□□ -0.6
PCDHA6-202ENST00000527624 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
PCDHA6-202ENST00000527624 MEGF8Q7Z7M0 2845 aa11.27□□□□□ -0.61
PCDHA6-202ENST00000527624 B5MCH6 92 aa11.27□□□□□ -0.61
PCDHA6-202ENST00000527624 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
PCDHA6-202ENST00000527624 M0R378 163 aa11.24□□□□□ -0.61
PCDHA6-202ENST00000527624 Q6JHZ5 121 aa11.24□□□□□ -0.61
PCDHA6-202ENST00000527624 NUPR2A6NF83 97 aa11.23□□□□□ -0.61
PCDHA6-202ENST00000527624 ZNF73O43830 326 aaPredicted RBP11.23□□□□□ -0.61
PCDHA6-202ENST00000527624 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
PCDHA6-202ENST00000527624 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
PCDHA6-202ENST00000527624 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.61
PCDHA6-202ENST00000527624 DYNC2H1Q8NCM8 4307 aaKnown RBP11.21□□□□□ -0.61
PCDHA6-202ENST00000527624 PLECQ15149 4684 aaKnown RBP11.21□□□□□ -0.61
PCDHA6-202ENST00000527624 PSCAO43653 123 aa11.21□□□□□ -0.62
PCDHA6-202ENST00000527624 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.62
PCDHA6-202ENST00000527624 IGKV3D-7A0A0C4DH55 119 aa11.2□□□□□ -0.62
PCDHA6-202ENST00000527624 Q6ZQY7 126 aa11.2□□□□□ -0.62
PCDHA6-202ENST00000527624 NKAPP1Q8N9T2 125 aa11.2□□□□□ -0.62
PCDHA6-202ENST00000527624 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
PCDHA6-202ENST00000527624 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms