RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
NEDD8-204ENST00000526430 IGKV2-24A0A0C4DH68 120 aa6.78□□□□□ -1.32
NEDD8-204ENST00000526430 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
NEDD8-204ENST00000526430 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
NEDD8-204ENST00000526430 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
NEDD8-204ENST00000526430 J3QQQ9 107 aa6.77□□□□□ -1.33
NEDD8-204ENST00000526430 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
NEDD8-204ENST00000526430 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
NEDD8-204ENST00000526430 GAGE2EQ4V326 116 aa6.76□□□□□ -1.33
NEDD8-204ENST00000526430 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
NEDD8-204ENST00000526430 GAGE2DQ9UEU5 116 aa6.76□□□□□ -1.33
NEDD8-204ENST00000526430 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
NEDD8-204ENST00000526430 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
NEDD8-204ENST00000526430 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
NEDD8-204ENST00000526430 Q8NDZ9 215 aa6.75□□□□□ -1.33
NEDD8-204ENST00000526430 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
NEDD8-204ENST00000526430 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
NEDD8-204ENST00000526430 PFN2P35080 140 aa6.74□□□□□ -1.33
NEDD8-204ENST00000526430 FSIP2Q5CZC0 6907 aa6.74□□□□□ -1.33
NEDD8-204ENST00000526430 HERVK_113P61574 105 aa6.73□□□□□ -1.33
NEDD8-204ENST00000526430 COX17Q14061 63 aa6.73□□□□□ -1.33
NEDD8-204ENST00000526430 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-204ENST00000526430 LITAFQ99732 161 aa6.73□□□□□ -1.33
NEDD8-204ENST00000526430 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
NEDD8-204ENST00000526430 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 C20orf202A1L168 122 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-204ENST00000526430 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 HERV-K104P63124 156 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
NEDD8-204ENST00000526430 A0A0U1RRA0 63 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
NEDD8-204ENST00000526430 NMUP48645 174 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.34
NEDD8-204ENST00000526430 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
NEDD8-204ENST00000526430 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
NEDD8-204ENST00000526430 PHF5AQ7RTV0 110 aaKnown RBP6.7□□□□□ -1.34
NEDD8-204ENST00000526430 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
NEDD8-204ENST00000526430 LINC00158P58513 81 aa6.69□□□□□ -1.34
NEDD8-204ENST00000526430 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
NEDD8-204ENST00000526430 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
NEDD8-204ENST00000526430 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 VPREB1P12018 145 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 AKR1D1P51857 326 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 PRR3P79522 188 aaKnown RBP6.68□□□□□ -1.34
NEDD8-204ENST00000526430 FAM19A5Q7Z5A7 132 aaPredicted RBP6.68□□□□□ -1.34
NEDD8-204ENST00000526430 DAND5Q8N907 189 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 C7orf33Q8WU49 177 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 C22orf24Q9Y442 160 aa6.68□□□□□ -1.34
NEDD8-204ENST00000526430 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
NEDD8-204ENST00000526430 SPINK6Q6UWN8 80 aa6.67□□□□□ -1.34
NEDD8-204ENST00000526430 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
NEDD8-204ENST00000526430 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
NEDD8-204ENST00000526430 TIMM17BO60830 172 aa6.65□□□□□ -1.34
NEDD8-204ENST00000526430 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
NEDD8-204ENST00000526430 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
NEDD8-204ENST00000526430 M0QXV9 152 aa6.64□□□□□ -1.35
NEDD8-204ENST00000526430 LCE2BO14633 110 aa6.64□□□□□ -1.35
NEDD8-204ENST00000526430 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
NEDD8-204ENST00000526430 COX8AP10176 69 aa6.63□□□□□ -1.35
NEDD8-204ENST00000526430 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
NEDD8-204ENST00000526430 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD8-204ENST00000526430 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
NEDD8-204ENST00000526430 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
NEDD8-204ENST00000526430 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 DLEU1O43261 78 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 SPATA45Q537H7 98 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
NEDD8-204ENST00000526430 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
NEDD8-204ENST00000526430 NPC2P61916 151 aa6.6□□□□□ -1.35
NEDD8-204ENST00000526430 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 GAGE10A6NGK3 116 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 NDUFC2O95298 119 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
NEDD8-204ENST00000526430 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
NEDD8-204ENST00000526430 M0R378 163 aa6.58□□□□□ -1.36
NEDD8-204ENST00000526430 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-204ENST00000526430 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
NEDD8-204ENST00000526430 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
NEDD8-204ENST00000526430 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
NEDD8-204ENST00000526430 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-204ENST00000526430 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
NEDD8-204ENST00000526430 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
NEDD8-204ENST00000526430 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
NEDD8-204ENST00000526430 NCR3O14931 201 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms