RNA–Protein interactions for RNA: ENST00000523015.1

DENND3-218, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-218ENST00000523015 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
DENND3-218ENST00000523015 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
DENND3-218ENST00000523015 TRAV12-1A0A0B4J245 112 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 IGKV2-29A2NJV5 120 aaPredicted RBP3.72□□□□□ -1.81
DENND3-218ENST00000523015 UBE2L6O14933 153 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 DPM2O94777 84 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 IGKCP01834 107 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 SYCNQ0VAF6 134 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 SMAGPQ0VAQ4 97 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 PMVKQ15126 192 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
DENND3-218ENST00000523015 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
DENND3-218ENST00000523015 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 F8VRH5 84 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 FGF6P10767 208 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 XCL1P47992 114 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 PAPPA-AS1Q5QFB9 102 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
DENND3-218ENST00000523015 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
DENND3-218ENST00000523015 IGLV4-3A0A075B6K6 122 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 IGHV1-58A0A0C4DH39 117 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 FAM168BA1KXE4 195 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 APOMO95445 188 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 PLNP26678 52 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
DENND3-218ENST00000523015 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 OPRPNQ99935 248 aaPredicted RBP3.7□□□□□ -1.82
DENND3-218ENST00000523015 C2orf88Q9BSF0 95 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 VCX2Q9H322 139 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 UBE2D4Q9Y2X8 147 aa3.7□□□□□ -1.82
DENND3-218ENST00000523015 H7C423 109 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 UBE2BP63146 152 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 RNASE13Q5GAN3 156 aaKnown RBP3.69□□□□□ -1.82
DENND3-218ENST00000523015 Q6ZUT4 128 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 OR5A1Q8NGJ0 315 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 CST9LQ9H4G1 147 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 UQCR10Q9UDW1 63 aa3.69□□□□□ -1.82
DENND3-218ENST00000523015 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 C11orf86A6NJI1 115 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 IGLC3P0DOY3 106 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 ZNF25P17030 456 aaPredicted RBP3.68□□□□□ -1.82
DENND3-218ENST00000523015 DDTP30046 118 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 NMUP48645 174 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 HERVK_113P61574 105 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 MRPS36P82909 103 aaKnown RBP3.68□□□□□ -1.82
DENND3-218ENST00000523015 TMEM170BQ5T4T1 132 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 MRPL52Q86TS9 123 aaKnown RBP3.68□□□□□ -1.82
DENND3-218ENST00000523015 C14orf144Q96I85 54 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 AMELXQ99217 191 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 MIEN1Q9BRT3 115 aa3.68□□□□□ -1.82
DENND3-218ENST00000523015 M0QXV9 152 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 CCL25O15444 150 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 PCP4P48539 62 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 SEC61BP60468 96 aaKnown RBP3.67□□□□□ -1.82
DENND3-218ENST00000523015 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 SLC25A34Q6PIV7 304 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 CAMK2N2Q96S95 79 aa3.67□□□□□ -1.82
DENND3-218ENST00000523015 CSDC2Q9Y534 153 aaKnown RBP3.67□□□□□ -1.82
DENND3-218ENST00000523015 TINCRA0A1B0GVN0 87 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 LINC00587B1AMM8 73 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 ZNF861PO60384 105 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 COX8AP10176 69 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 ZNF22P17026 224 aaPredicted RBP3.66□□□□□ -1.82
DENND3-218ENST00000523015 KRTAP13-3Q3SY46 172 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 FAM104AQ969W3 186 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
DENND3-218ENST00000523015 CDC42SE2Q9NRR3 84 aa3.66□□□□□ -1.82
DENND3-218ENST00000523015 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 TRAV13-1A0A0B4J241 112 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 E9PLD3 99 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 H3BRM9 83 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 M0R2T5 61 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 PRYO14603 147 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 HERVK_113P63121 156 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 SEC11AP67812 179 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 PCP2Q8IVA1 136 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 BOD1L2Q8IYS8 172 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 LINC00469Q8N7U9 141 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 TP73-AS1Q9UF72 201 aa3.65□□□□□ -1.83
DENND3-218ENST00000523015 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 LEPROTO15243 131 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 DLEU1O43261 78 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
DENND3-218ENST00000523015 CTAG1AP78358 180 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 TTTY13Q9BZ97 58 aa3.64□□□□□ -1.83
DENND3-218ENST00000523015 LINC00959A0A1B0GUT2 108 aa3.63□□□□□ -1.83
DENND3-218ENST00000523015 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms