RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 LITAFQ99732 161 aa14.33□□□□□ -0.12
NKX6-3-201ENST00000518699 IGLV5-37A0A075B6J1 123 aa14.32□□□□□ -0.12
NKX6-3-201ENST00000518699 C7orf33Q8WU49 177 aa14.32□□□□□ -0.12
NKX6-3-201ENST00000518699 TP73-AS1Q9UF72 201 aa14.32□□□□□ -0.12
NKX6-3-201ENST00000518699 DAND5Q8N907 189 aa14.31□□□□□ -0.12
NKX6-3-201ENST00000518699 VAMP8Q9BV40 100 aa14.31□□□□□ -0.12
NKX6-3-201ENST00000518699 FAT1Q14517 4588 aa14.3□□□□□ -0.12
NKX6-3-201ENST00000518699 LOC107984156A0A0G2JMH3 177 aa14.3□□□□□ -0.12
NKX6-3-201ENST00000518699 PHF5AQ7RTV0 110 aaKnown RBP14.3□□□□□ -0.12
NKX6-3-201ENST00000518699 ARL17AQ8IVW1 177 aa14.3□□□□□ -0.12
NKX6-3-201ENST00000518699 VPREB1P12018 145 aa14.29□□□□□ -0.12
NKX6-3-201ENST00000518699 ADAMTSL4-AS1Q5T5F5 129 aa14.29□□□□□ -0.12
NKX6-3-201ENST00000518699 Q5VSD8 79 aa14.29□□□□□ -0.12
NKX6-3-201ENST00000518699 SCGB1D4Q6XE38 83 aa14.29□□□□□ -0.12
NKX6-3-201ENST00000518699 FAM229AH3BQW9 127 aa14.28□□□□□ -0.12
NKX6-3-201ENST00000518699 PAM16Q9Y3D7 125 aa14.28□□□□□ -0.12
NKX6-3-201ENST00000518699 C22orf24Q9Y442 160 aa14.28□□□□□ -0.12
NKX6-3-201ENST00000518699 RPL24P83731 157 aaKnown RBP14.27□□□□□ -0.12
NKX6-3-201ENST00000518699 Q8NDZ9 215 aa14.27□□□□□ -0.12
NKX6-3-201ENST00000518699 TMEM238C9JI98 176 aa14.26□□□□□ -0.13
NKX6-3-201ENST00000518699 SPATA45Q537H7 98 aa14.26□□□□□ -0.13
NKX6-3-201ENST00000518699 COX8AP10176 69 aa14.25□□□□□ -0.13
NKX6-3-201ENST00000518699 MRPL55Q7Z7F7 128 aaKnown RBP14.25□□□□□ -0.13
NKX6-3-201ENST00000518699 NKAPP1Q8N9T2 125 aa14.25□□□□□ -0.13
NKX6-3-201ENST00000518699 MIEN1Q9BRT3 115 aa14.25□□□□□ -0.13
NKX6-3-201ENST00000518699 LBHQ53QV2 105 aaPredicted RBP14.24□□□□□ -0.13
NKX6-3-201ENST00000518699 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
NKX6-3-201ENST00000518699 SPANXDQ9BXN6 97 aa14.24□□□□□ -0.13
NKX6-3-201ENST00000518699 SPANXCQ9NY87 97 aa14.24□□□□□ -0.13
NKX6-3-201ENST00000518699 VPS13BQ7Z7G8 4022 aa14.24□□□□□ -0.13
NKX6-3-201ENST00000518699 PLA2G1BP04054 148 aaKnown RBP14.23□□□□□ -0.13
NKX6-3-201ENST00000518699 RPL37AP61513 92 aaKnown RBP14.23□□□□□ -0.13
NKX6-3-201ENST00000518699 DLEU1O43261 78 aa14.22□□□□□ -0.13
NKX6-3-201ENST00000518699 KRTAP10-4P60372 401 aaPredicted RBP14.22□□□□□ -0.13
NKX6-3-201ENST00000518699 SOSTDC1Q6X4U4 206 aa14.22□□□□□ -0.13
NKX6-3-201ENST00000518699 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.14
NKX6-3-201ENST00000518699 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 NDUFC2O95298 119 aa14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 UBE2BP63146 152 aa14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 PRR3P79522 188 aaKnown RBP14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 Q6ZVH6 145 aa14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 KRTAP11-1Q8IUC1 163 aa14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 LINC00167Q96N53 147 aa14.2□□□□□ -0.14
NKX6-3-201ENST00000518699 NPC2P61916 151 aa14.19□□□□□ -0.14
NKX6-3-201ENST00000518699 PPDPFQ9H3Y8 114 aa14.19□□□□□ -0.14
NKX6-3-201ENST00000518699 SPANXB1Q9NS25 103 aaPredicted RBP14.18□□□□□ -0.14
NKX6-3-201ENST00000518699 C14orf144Q96I85 54 aa14.17□□□□□ -0.14
NKX6-3-201ENST00000518699 PSORS1C2Q9UIG4 136 aa14.17□□□□□ -0.14
NKX6-3-201ENST00000518699 GAGE10A6NGK3 116 aa14.16□□□□□ -0.14
NKX6-3-201ENST00000518699 M0R378 163 aa14.16□□□□□ -0.14
NKX6-3-201ENST00000518699 IFITM1P13164 125 aa14.16□□□□□ -0.14
NKX6-3-201ENST00000518699 COPS9Q8WXC6 57 aa14.16□□□□□ -0.14
NKX6-3-201ENST00000518699 KRTAP4-5Q9BYR2 181 aa14.16□□□□□ -0.14
NKX6-3-201ENST00000518699 TRBV10-2A0A0K0K1G8 114 aa14.15□□□□□ -0.14
NKX6-3-201ENST00000518699 LOC105371267A0A1B0GV96 52 aa14.15□□□□□ -0.14
NKX6-3-201ENST00000518699 NCR3O14931 201 aa14.14□□□□□ -0.15
NKX6-3-201ENST00000518699 SLC25A34Q6PIV7 304 aa14.14□□□□□ -0.15
NKX6-3-201ENST00000518699 SMIM6P0DI80 62 aa14.13□□□□□ -0.15
NKX6-3-201ENST00000518699 IGLV1-50A0A075B6I6 118 aa14.12□□□□□ -0.15
NKX6-3-201ENST00000518699 RPL37AP8A6NKH3 93 aa14.12□□□□□ -0.15
NKX6-3-201ENST00000518699 S100A12P80511 92 aa14.12□□□□□ -0.15
NKX6-3-201ENST00000518699 HIGD1BQ9P298 99 aa14.1□□□□□ -0.15
NKX6-3-201ENST00000518699 PKHD1L1Q86WI1 4243 aa14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 IGKV2-28A0A075B6P5 120 aa14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 IGKV2D-28P01615 120 aa14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 C1orf137Q5JT78 98 aa14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 SRSF9Q13242 221 aaKnown RBP eCLIP14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 MUSTN1Q8IVN3 82 aa14.09□□□□□ -0.15
NKX6-3-201ENST00000518699 C2orf91Q6ZV80 131 aa14.08□□□□□ -0.16
NKX6-3-201ENST00000518699 ABCA13Q86UQ4 5058 aa14.05□□□□□ -0.16
NKX6-3-201ENST00000518699 SRRM2Q9UQ35 2752 aaKnown RBP14.05□□□□□ -0.16
NKX6-3-201ENST00000518699 TRBV10-3A0A0K0K1G6 114 aa14.05□□□□□ -0.16
NKX6-3-201ENST00000518699 HNRNPA3P51991 378 aaKnown RBP14.05□□□□□ -0.16
NKX6-3-201ENST00000518699 IGLV6-57P01721 117 aa14.04□□□□□ -0.16
NKX6-3-201ENST00000518699 IGLV7-43P04211 117 aa14.04□□□□□ -0.16
NKX6-3-201ENST00000518699 LINC00518Q8N0U6 118 aa14.04□□□□□ -0.16
NKX6-3-201ENST00000518699 PRYO14603 147 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 BCE1O60756 84 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 DDTP30046 118 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 HIST1H4GQ99525 98 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 TMEM126AQ9H061 195 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 KCNQ1DNQ9H478 68 aa14.03□□□□□ -0.16
NKX6-3-201ENST00000518699 REG3GQ6UW15 175 aa14.02□□□□□ -0.17
NKX6-3-201ENST00000518699 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
NKX6-3-201ENST00000518699 LINC00337Q8N6G1 96 aa14□□□□□ -0.17
NKX6-3-201ENST00000518699 UQCR10Q9UDW1 63 aa14□□□□□ -0.17
NKX6-3-201ENST00000518699 INAFM2P0DMQ5 153 aa13.99□□□□□ -0.17
NKX6-3-201ENST00000518699 SPRR1AP35321 89 aa13.98□□□□□ -0.17
NKX6-3-201ENST00000518699 SPINK6Q6UWN8 80 aa13.98□□□□□ -0.17
NKX6-3-201ENST00000518699 TAL2Q16559 108 aa13.97□□□□□ -0.17
NKX6-3-201ENST00000518699 A4D1N5 150 aa13.96□□□□□ -0.17
NKX6-3-201ENST00000518699 KRTAP13-1Q8IUC0 172 aa13.96□□□□□ -0.17
NKX6-3-201ENST00000518699 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.18
NKX6-3-201ENST00000518699 PCLOQ9Y6V0 5065 aa13.95□□□□□ -0.18
NKX6-3-201ENST00000518699 TRAV23DV6A0A075B6W5 121 aa13.95□□□□□ -0.18
NKX6-3-201ENST00000518699 ZNF861PO60384 105 aa13.95□□□□□ -0.18
NKX6-3-201ENST00000518699 KRTAP4-16G5E9R7 235 aaPredicted RBP13.94□□□□□ -0.18
NKX6-3-201ENST00000518699 OR13C6PQ8NH95 151 aa13.94□□□□□ -0.18
NKX6-3-201ENST00000518699 RPL28P46779 137 aaKnown RBP13.93□□□□□ -0.18
NKX6-3-201ENST00000518699 FAM19A1Q7Z5A9 133 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms