RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
MRPS28-203ENST00000518371 NUPR1O60356 82 aa3.8□□□□□ -1.8
MRPS28-203ENST00000518371 PHF5AQ7RTV0 110 aaKnown RBP3.8□□□□□ -1.8
MRPS28-203ENST00000518371 XAGE1AQ9HD64 81 aa3.8□□□□□ -1.8
MRPS28-203ENST00000518371 HSPB8Q9UJY1 196 aa3.8□□□□□ -1.8
MRPS28-203ENST00000518371 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BKO60814 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BJP06899 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 S100A1P23297 94 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BOP23527 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BBP33778 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 PFN2P35080 140 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BDP58876 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BCP62807 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 UBE2BP63146 152 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST2H2BEQ16778 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.79□□□□□ -1.8
MRPS28-203ENST00000518371 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BHQ93079 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 ZNF625Q96I27 306 aaPredicted RBP3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BNQ99877 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 HIST1H2BMQ99879 126 aa3.79□□□□□ -1.8
MRPS28-203ENST00000518371 TMEM223A0PJW6 202 aa3.78□□□□□ -1.8
MRPS28-203ENST00000518371 M0QXV9 152 aa3.78□□□□□ -1.8
MRPS28-203ENST00000518371 HNRNPA3P51991 378 aaKnown RBP3.78□□□□□ -1.8
MRPS28-203ENST00000518371 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
MRPS28-203ENST00000518371 MAP1LC3CQ9BXW4 147 aa3.78□□□□□ -1.8
MRPS28-203ENST00000518371 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
MRPS28-203ENST00000518371 ATP6V1G1O75348 118 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 DPM2O94777 84 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 OXTP01178 125 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 LINC00158P58513 81 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 LBHQ53QV2 105 aaPredicted RBP3.77□□□□□ -1.81
MRPS28-203ENST00000518371 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 PMCHL2Q9BQD1 86 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 PSORS1C2Q9UIG4 136 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 ERG28Q9UKR5 140 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 C22orf24Q9Y442 160 aa3.77□□□□□ -1.81
MRPS28-203ENST00000518371 A0A0U1RRA0 63 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 IGKCP01834 107 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 PLNP26678 52 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 HERVK_113P61574 105 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 COX17Q14061 63 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 SERTAD4-AS1Q5TG53 156 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 SPINK6Q6UWN8 80 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
MRPS28-203ENST00000518371 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 LEPROTO15243 131 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
MRPS28-203ENST00000518371 MEIG1Q5JSS6 88 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 MRPL55Q7Z7F7 128 aaKnown RBP3.75□□□□□ -1.81
MRPS28-203ENST00000518371 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 NKAPP1Q8N9T2 125 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 NDUFA12Q9UI09 145 aa3.75□□□□□ -1.81
MRPS28-203ENST00000518371 GAGE10A6NGK3 116 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 RPL37AP8A6NKH3 93 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 LINC00587B1AMM8 73 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 SYS1-DBNDD2H3BUS1 97 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 J3QQQ9 107 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 IGLV7-43P04211 117 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
MRPS28-203ENST00000518371 HERV-K104P63124 156 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
MRPS28-203ENST00000518371 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
MRPS28-203ENST00000518371 PET117Q6UWS5 81 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 LINC00167Q96N53 147 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 TP73-AS1Q9UF72 201 aa3.74□□□□□ -1.81
MRPS28-203ENST00000518371 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
MRPS28-203ENST00000518371 KRTDAPP60985 99 aa3.73□□□□□ -1.81
MRPS28-203ENST00000518371 DIRC1Q969H9 104 aa3.73□□□□□ -1.81
MRPS28-203ENST00000518371 IGLV5-37A0A075B6J1 123 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 C20orf202A1L168 122 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 NMUP48645 174 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 LINC01545Q5VT33 79 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
MRPS28-203ENST00000518371 IGKV2-28A0A075B6P5 120 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 E9PLD3 99 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 IGKV2D-28P01615 120 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 S100A6P06703 90 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 VPREB1P12018 145 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 S100A2P29034 98 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 TSPEAR-AS2P59090 65 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 BOD1L2Q8IYS8 172 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 LINC01600Q96MT4 127 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
MRPS28-203ENST00000518371 H0Y9J4 135 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 M0R378 163 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 ZNF861PO60384 105 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 BCE1O60756 84 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 RPL28P46779 137 aaKnown RBP3.7□□□□□ -1.82
MRPS28-203ENST00000518371 UBE2AP49459 152 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 DAND5Q8N907 189 aa3.7□□□□□ -1.82
MRPS28-203ENST00000518371 PKHD1L1Q86WI1 4243 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms