RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DAND5Q8N907 189 aa6.21□□□□□ -1.42
CLN8-202ENST00000517514 PAM16Q9Y3D7 125 aa6.21□□□□□ -1.42
CLN8-202ENST00000517514 SPATA45Q537H7 98 aa6.2□□□□□ -1.42
CLN8-202ENST00000517514 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
CLN8-202ENST00000517514 SOSTDC1Q6X4U4 206 aa6.2□□□□□ -1.42
CLN8-202ENST00000517514 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
CLN8-202ENST00000517514 PKIGQ9Y2B9 76 aa6.2□□□□□ -1.42
CLN8-202ENST00000517514 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 TIMM17BO60830 172 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 COX8AP10176 69 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 BOD1L2Q8IYS8 172 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
CLN8-202ENST00000517514 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
CLN8-202ENST00000517514 VPREB1P12018 145 aa6.18□□□□□ -1.42
CLN8-202ENST00000517514 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
CLN8-202ENST00000517514 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
CLN8-202ENST00000517514 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
CLN8-202ENST00000517514 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
CLN8-202ENST00000517514 IGLV5-37A0A075B6J1 123 aa6.17□□□□□ -1.42
CLN8-202ENST00000517514 DLEU1O43261 78 aa6.17□□□□□ -1.42
CLN8-202ENST00000517514 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
CLN8-202ENST00000517514 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
CLN8-202ENST00000517514 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
CLN8-202ENST00000517514 DPH3Q96FX2 82 aa6.17□□□□□ -1.42
CLN8-202ENST00000517514 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
CLN8-202ENST00000517514 LINC00587B1AMM8 73 aa6.16□□□□□ -1.42
CLN8-202ENST00000517514 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
CLN8-202ENST00000517514 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
CLN8-202ENST00000517514 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
CLN8-202ENST00000517514 SPANXCQ9NY87 97 aa6.16□□□□□ -1.42
CLN8-202ENST00000517514 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
CLN8-202ENST00000517514 NPC2P61916 151 aa6.15□□□□□ -1.42
CLN8-202ENST00000517514 LINC00308Q8TCZ7 52 aa6.15□□□□□ -1.42
CLN8-202ENST00000517514 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
CLN8-202ENST00000517514 M0QXV9 152 aa6.14□□□□□ -1.43
CLN8-202ENST00000517514 SMIM6P0DI80 62 aa6.14□□□□□ -1.43
CLN8-202ENST00000517514 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
CLN8-202ENST00000517514 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
CLN8-202ENST00000517514 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
CLN8-202ENST00000517514 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
CLN8-202ENST00000517514 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
CLN8-202ENST00000517514 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
CLN8-202ENST00000517514 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
CLN8-202ENST00000517514 SLC25A34Q6PIV7 304 aa6.12□□□□□ -1.43
CLN8-202ENST00000517514 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
CLN8-202ENST00000517514 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
CLN8-202ENST00000517514 Q8N1X5 172 aa6.12□□□□□ -1.43
CLN8-202ENST00000517514 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
CLN8-202ENST00000517514 NCR3O14931 201 aa6.11□□□□□ -1.43
CLN8-202ENST00000517514 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
CLN8-202ENST00000517514 PPDPFQ9H3Y8 114 aa6.11□□□□□ -1.43
CLN8-202ENST00000517514 HIGD1BQ9P298 99 aa6.11□□□□□ -1.43
CLN8-202ENST00000517514 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 NDUFC2O95298 119 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 RPL24P83731 157 aaKnown RBP6.1□□□□□ -1.43
CLN8-202ENST00000517514 Q6ZVH6 145 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 PRO1933Q9H354 126 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
CLN8-202ENST00000517514 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 M0R378 163 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 IFITM1P13164 125 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 HNRNPA3P51991 378 aaKnown RBP6.09□□□□□ -1.43
CLN8-202ENST00000517514 S100A12P80511 92 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 Q5VSD8 79 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 LINC00518Q8N0U6 118 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 NKAPP1Q8N9T2 125 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 C12orf57Q99622 126 aa6.09□□□□□ -1.43
CLN8-202ENST00000517514 TRBV10-2A0A0K0K1G8 114 aa6.08□□□□□ -1.44
CLN8-202ENST00000517514 LBHQ53QV2 105 aaPredicted RBP6.08□□□□□ -1.44
CLN8-202ENST00000517514 LINC00337Q8N6G1 96 aa6.08□□□□□ -1.44
CLN8-202ENST00000517514 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
CLN8-202ENST00000517514 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
CLN8-202ENST00000517514 SRSF9Q13242 221 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLN8-202ENST00000517514 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
CLN8-202ENST00000517514 UQCR10Q9UDW1 63 aa6.07□□□□□ -1.44
CLN8-202ENST00000517514 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
CLN8-202ENST00000517514 A4D1N5 150 aa6.06□□□□□ -1.44
CLN8-202ENST00000517514 LCE2BO14633 110 aa6.06□□□□□ -1.44
CLN8-202ENST00000517514 IGLV6-57P01721 117 aa6.06□□□□□ -1.44
CLN8-202ENST00000517514 UBE2BP63146 152 aa6.06□□□□□ -1.44
CLN8-202ENST00000517514 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
CLN8-202ENST00000517514 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
CLN8-202ENST00000517514 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CLN8-202ENST00000517514 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
CLN8-202ENST00000517514 MYCBP2O75592 4640 aa6.05□□□□□ -1.44
CLN8-202ENST00000517514 DDTP30046 118 aa6.04□□□□□ -1.44
CLN8-202ENST00000517514 SPRR1AP35321 89 aa6.04□□□□□ -1.44
CLN8-202ENST00000517514 TAL2Q16559 108 aa6.04□□□□□ -1.44
CLN8-202ENST00000517514 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
CLN8-202ENST00000517514 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
CLN8-202ENST00000517514 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
CLN8-202ENST00000517514 FXYD2P54710 66 aa6.03□□□□□ -1.44
CLN8-202ENST00000517514 C1orf137Q5JT78 98 aa6.03□□□□□ -1.44
CLN8-202ENST00000517514 CEND1Q8N111 149 aa6.03□□□□□ -1.44
CLN8-202ENST00000517514 PRYO14603 147 aa6.02□□□□□ -1.45
CLN8-202ENST00000517514 BCE1O60756 84 aa6.02□□□□□ -1.45
CLN8-202ENST00000517514 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms