RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 CDC26Q8NHZ8 85 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 LSM10Q969L4 123 aaKnown RBP-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 PSENENQ9NZ42 101 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 ARL2BPQ9Y2Y0 163 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 MAPKBP1O60336 1514 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 RGPD2P0DJD1 1756 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 FRYLO94915 3013 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 SCN7AQ01118 1682 aa-1.83□□□□□ -2.7
SNORA40.17-201ENST00000517256 CAMSAP1Q5T5Y3 1602 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 DCHS1Q96JQ0 3298 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 SZT2Q5T011 3432 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 CUX1P39880 1505 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 LINC01546A6NGU7 62 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 A8MTW9 85 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 H0Y9P7 68 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 IGLC6P0CF74 106 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 IAPPP10997 89 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 COX7BP24311 80 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 NCS1P62166 190 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 REEP5Q00765 189 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 PSMG3Q9BT73 122 aaPredicted RBP-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 HIGD1AQ9Y241 93 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 V9GYQ6 96 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 USP32Q8NFA0 1604 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 MUC3AQ02505 3323 aa-1.84□□□□□ -2.7
SNORA40.17-201ENST00000517256 MAST1Q9Y2H9 1570 aa-1.85□□□□□ -2.7
SNORA40.17-201ENST00000517256 EHBP1L1Q8N3D4 1523 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 WIZO95785 1651 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 C7orf77A4D0Y5 90 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 LYNX1G3V0Z9 82 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 K7EP13 123 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 LINC00694P0DN24 101 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 GNGT1P63211 74 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 UBE2L3P68036 154 aaKnown RBP-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 HIST1H1AQ02539 215 aaPredicted RBP-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 TMEM128Q5BJH2 165 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 PTRHD1Q6GMV3 140 aaKnown RBP-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 CTAGE3PQ8IX95 158 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 TCTE3Q8IZS6 198 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 OR9Q1Q8NGQ5 310 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 TCEAL4Q96EI5 215 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 ATP6V1G3Q96LB4 118 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 HOPXQ9BPY8 73 aaPredicted RBP-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 WDFY4Q6ZS81 3184 aa-1.85□□□□□ -2.71
SNORA40.17-201ENST00000517256 PREX1Q8TCU6 1659 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 TPM2P07951 284 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 SCTP09683 121 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 CTXN2P0C2S0 81 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 CDKN2CP42773 168 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 TCTAP57738 103 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 PSMG4Q5JS54 123 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 SPANXDQ9BXN6 97 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 DNAH14Q0VDD8 3507 aa-1.86□□□□□ -2.71
SNORA40.17-201ENST00000517256 TARBP1Q13395 1621 aaKnown RBP-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 F8WEM9 126 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 H3BQF6 201 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 SMARCA2P51531 1590 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 NUP188Q5SRE5 1749 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 SERP2Q8N6R1 65 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 TMEM35BQ8NCS4 154 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 CEP19Q96LK0 163 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 AIF1LQ9BQI0 150 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 TOGARAM1Q9Y4F4 1720 aa-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.87□□□□□ -2.71
SNORA40.17-201ENST00000517256 CDK5RAP2Q96SN8 1893 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 TRAV36DV7A0A075B6V5 113 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 SMIM23A6NLE4 172 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 IFI6P09912 130 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 IGLC2P0DOY2 106 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 IGLC3P0DOY3 106 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 MAGOHBQ96A72 148 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 DPH3Q96FX2 82 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 SNRNP25Q9BV90 132 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 BOLA2Q9H3K6 86 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 UQCR10Q9UDW1 63 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 ANKRD36CQ5JPF3 1778 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 TEX14Q8IWB6 1497 aa-1.88□□□□□ -2.71
SNORA40.17-201ENST00000517256 SAMD9Q5K651 1589 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 CUL7Q14999 1698 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 TPM3P06753 285 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 WT1-ASQ06250 92 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 DEFB136Q30KP8 78 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 PPP1R14BQ96C90 147 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 MANBALQ9NQG1 85 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 A2ML1A8K2U0 1454 aa-1.89□□□□□ -2.71
SNORA40.17-201ENST00000517256 CPSF1Q10570 1443 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 EP400Q96L91 3159 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 A0A1B0GX51 115 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 SPART-AS1P0CW21 52 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 TRAPPC2P0DI81 140 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 TRAPPC2BP0DI82 140 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 SCGB1A1P11684 91 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 MRPS25P82663 173 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 Q0VG73 95 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 COMMD6Q7Z4G1 85 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 KCNRGQ8N5I3 272 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 TRGV9Q99603 122 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 MRC2Q9UBG0 1479 aa-1.9□□□□□ -2.71
SNORA40.17-201ENST00000517256 TOPAZ1Q8N9V7 1692 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms