RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 STPG4Q8N801 248 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 ERG28Q9UKR5 140 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 PANO1I0J062 215 aa4.48□□□□□ -1.69
SMAD1-213ENST00000514778 CHTF8P0CG12 524 aa4.48□□□□□ -1.69
SMAD1-213ENST00000514778 C9orf116Q5BN46 136 aaPredicted RBP4.48□□□□□ -1.69
SMAD1-213ENST00000514778 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
SMAD1-213ENST00000514778 LGALS3P17931 250 aaKnown RBP4.47□□□□□ -1.69
SMAD1-213ENST00000514778 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
SMAD1-213ENST00000514778 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
SMAD1-213ENST00000514778 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
SMAD1-213ENST00000514778 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
SMAD1-213ENST00000514778 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
SMAD1-213ENST00000514778 LRP1BQ9NZR2 4599 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 LOC107984156A0A0G2JMH3 177 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 HSBP1L1C9JCN9 74 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 TIMM17BO60830 172 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 PFN2P35080 140 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 LINC00158P58513 81 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 RPL24P83731 157 aaKnown RBP4.45□□□□□ -1.7
SMAD1-213ENST00000514778 LBHQ53QV2 105 aaPredicted RBP4.45□□□□□ -1.7
SMAD1-213ENST00000514778 ARL17AQ8IVW1 177 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 SND1-IT1Q9HBX3 110 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
SMAD1-213ENST00000514778 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
SMAD1-213ENST00000514778 SMR3BP02814 79 aaPredicted RBP4.44□□□□□ -1.7
SMAD1-213ENST00000514778 MEIG1Q5JSS6 88 aa4.44□□□□□ -1.7
SMAD1-213ENST00000514778 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
SMAD1-213ENST00000514778 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 SMIM13P0DJ93 91 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 HAMPP81172 84 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 JOSD1Q15040 202 aaPredicted RBP4.43□□□□□ -1.7
SMAD1-213ENST00000514778 Q5VSD8 79 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 PPDPFQ9H3Y8 114 aa4.43□□□□□ -1.7
SMAD1-213ENST00000514778 IGKV2D-26A0A0A0MRZ7 120 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 LOC105371267A0A1B0GV96 52 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 M0QXV9 152 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 RPL37AP61513 92 aaKnown RBP4.42□□□□□ -1.7
SMAD1-213ENST00000514778 Q6ZVH6 145 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
SMAD1-213ENST00000514778 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 C22orf24Q9Y442 160 aa4.42□□□□□ -1.7
SMAD1-213ENST00000514778 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 TMEM238C9JI98 176 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 DLEU1O43261 78 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 NDUFC2O95298 119 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 VPREB1P12018 145 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
SMAD1-213ENST00000514778 PYY3Q5JQD4 70 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
SMAD1-213ENST00000514778 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
SMAD1-213ENST00000514778 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
SMAD1-213ENST00000514778 TRBV10-2A0A0K0K1G8 114 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 SMIM6P0DI80 62 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 IFITM1P13164 125 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 UBE2BP63146 152 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
SMAD1-213ENST00000514778 SCGB1D4Q6XE38 83 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
SMAD1-213ENST00000514778 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 SPANXCQ9NY87 97 aa4.4□□□□□ -1.71
SMAD1-213ENST00000514778 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
SMAD1-213ENST00000514778 A0A0U1RRA0 63 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 M0R378 163 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 ADAMTSL4-AS1Q5T5F5 129 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 LINC00167Q96N53 147 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 LITAFQ99732 161 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
SMAD1-213ENST00000514778 HSPG2P98160 4391 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 KIAA1109Q2LD37 5005 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 INAFM2P0DMQ5 153 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 COX8AP10176 69 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 S100A12P80511 92 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 PCP2Q8IVA1 136 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 LINC00308Q8TCZ7 52 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
SMAD1-213ENST00000514778 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
SMAD1-213ENST00000514778 BCE1O60756 84 aa4.37□□□□□ -1.71
SMAD1-213ENST00000514778 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMAD1-213ENST00000514778 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
SMAD1-213ENST00000514778 DAND5Q8N907 189 aa4.37□□□□□ -1.71
SMAD1-213ENST00000514778 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
SMAD1-213ENST00000514778 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
SMAD1-213ENST00000514778 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
SMAD1-213ENST00000514778 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms