RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
UBE2D3-232ENST00000514755 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBE2D3-232ENST00000514755 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
UBE2D3-232ENST00000514755 TRAV12-1A0A0B4J245 112 aa6.76□□□□□ -1.33
UBE2D3-232ENST00000514755 M0QXV9 152 aa6.76□□□□□ -1.33
UBE2D3-232ENST00000514755 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
UBE2D3-232ENST00000514755 TNXBP22105 4242 aa6.75□□□□□ -1.33
UBE2D3-232ENST00000514755 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
UBE2D3-232ENST00000514755 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 H0Y8G0 127 aa6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 ZNF625Q96I27 306 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 FABP4P15090 132 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 PFN2P35080 140 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
UBE2D3-232ENST00000514755 UBE2BP63146 152 aa6.72□□□□□ -1.33
UBE2D3-232ENST00000514755 PRYO14603 147 aa6.71□□□□□ -1.34
UBE2D3-232ENST00000514755 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
UBE2D3-232ENST00000514755 ERG28Q9UKR5 140 aa6.71□□□□□ -1.34
UBE2D3-232ENST00000514755 LINC01600Q96MT4 127 aa6.7□□□□□ -1.34
UBE2D3-232ENST00000514755 PMCHL2Q9BQD1 86 aa6.7□□□□□ -1.34
UBE2D3-232ENST00000514755 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
UBE2D3-232ENST00000514755 Q8NDZ9 215 aa6.69□□□□□ -1.34
UBE2D3-232ENST00000514755 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
UBE2D3-232ENST00000514755 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
UBE2D3-232ENST00000514755 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 RPL37AP8A6NKH3 93 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 SND1-IT1Q9HBX3 110 aa6.68□□□□□ -1.34
UBE2D3-232ENST00000514755 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
UBE2D3-232ENST00000514755 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
UBE2D3-232ENST00000514755 VPREB1P12018 145 aa6.66□□□□□ -1.34
UBE2D3-232ENST00000514755 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
UBE2D3-232ENST00000514755 COX17Q14061 63 aa6.66□□□□□ -1.34
UBE2D3-232ENST00000514755 LBHQ53QV2 105 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-232ENST00000514755 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
UBE2D3-232ENST00000514755 DPM2O94777 84 aa6.65□□□□□ -1.34
UBE2D3-232ENST00000514755 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
UBE2D3-232ENST00000514755 LINC00158P58513 81 aa6.65□□□□□ -1.34
UBE2D3-232ENST00000514755 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
UBE2D3-232ENST00000514755 H0Y9J4 135 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 IGKCP01834 107 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 PLNP26678 52 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
UBE2D3-232ENST00000514755 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 LEPROTO15243 131 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 DIRC1Q969H9 104 aa6.63□□□□□ -1.35
UBE2D3-232ENST00000514755 ZNF861PO60384 105 aa6.62□□□□□ -1.35
UBE2D3-232ENST00000514755 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-232ENST00000514755 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
UBE2D3-232ENST00000514755 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 J3QQQ9 107 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 BCE1O60756 84 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 ATP6V1G1O75348 118 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 HERV-K104P63124 156 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 PRR26Q8N8Z3 221 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
UBE2D3-232ENST00000514755 TMEM238C9JI98 176 aa6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 C3orf79P0CE67 100 aa6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 HERVK_113P61574 105 aa6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 DAND5Q8N907 189 aa6.6□□□□□ -1.35
UBE2D3-232ENST00000514755 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-232ENST00000514755 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
UBE2D3-232ENST00000514755 E9PLD3 99 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 M0R378 163 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 S100A1P23297 94 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 PET117Q6UWS5 81 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 BOD1L2Q8IYS8 172 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
UBE2D3-232ENST00000514755 NCR3O14931 201 aa6.57□□□□□ -1.36
UBE2D3-232ENST00000514755 RPL28P46779 137 aaKnown RBP6.57□□□□□ -1.36
UBE2D3-232ENST00000514755 PCP4P48539 62 aa6.57□□□□□ -1.36
UBE2D3-232ENST00000514755 KRTDAPP60985 99 aa6.57□□□□□ -1.36
UBE2D3-232ENST00000514755 PRLHP81277 87 aa6.57□□□□□ -1.36
UBE2D3-232ENST00000514755 IGKV2D-26A0A0A0MRZ7 120 aa6.56□□□□□ -1.36
UBE2D3-232ENST00000514755 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
UBE2D3-232ENST00000514755 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms