RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 C20orf202A1L168 122 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 PCP4L1A6NKN8 68 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 NDUFC2-KCTD14E9PQ53 114 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 PFN2P35080 140 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 STPG4Q8N801 248 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 XAGE1AQ9HD64 81 aa6.2□□□□□ -1.42
TOPBP1-209ENST00000513818 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 LEPROTO15243 131 aa6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 C9orf129Q5T035 196 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 NDUFA12Q9UI09 145 aa6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
TOPBP1-209ENST00000513818 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 J3QQQ9 107 aa6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 PLAC8Q9NZF1 115 aa6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 ERG28Q9UKR5 140 aa6.18□□□□□ -1.42
TOPBP1-209ENST00000513818 E9PLD3 99 aa6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 Q5VSD8 79 aa6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
TOPBP1-209ENST00000513818 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
TOPBP1-209ENST00000513818 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
TOPBP1-209ENST00000513818 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
TOPBP1-209ENST00000513818 LINC00158P58513 81 aa6.15□□□□□ -1.42
TOPBP1-209ENST00000513818 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-209ENST00000513818 Q8N1X5 172 aa6.15□□□□□ -1.42
TOPBP1-209ENST00000513818 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
TOPBP1-209ENST00000513818 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
TOPBP1-209ENST00000513818 NMUP48645 174 aa6.14□□□□□ -1.43
TOPBP1-209ENST00000513818 DAND5Q8N907 189 aa6.14□□□□□ -1.43
TOPBP1-209ENST00000513818 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
TOPBP1-209ENST00000513818 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 M0QXV9 152 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 HERV-K104P63124 156 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 Q8NDZ9 215 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
TOPBP1-209ENST00000513818 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 RPL37AP61513 92 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 NPC2P61916 151 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 PCP2Q8IVA1 136 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
TOPBP1-209ENST00000513818 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
TOPBP1-209ENST00000513818 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-209ENST00000513818 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-209ENST00000513818 COX17Q14061 63 aa6.1□□□□□ -1.43
TOPBP1-209ENST00000513818 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
TOPBP1-209ENST00000513818 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
TOPBP1-209ENST00000513818 HNRNPA3P51991 378 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-209ENST00000513818 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
TOPBP1-209ENST00000513818 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 NCR3O14931 201 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 AKR1D1P51857 326 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 SEC61GP60059 68 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 UBE2BP63146 152 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 SOSTDC1Q6X4U4 206 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 BOD1L2Q8IYS8 172 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 LITAFQ99732 161 aa6.08□□□□□ -1.44
TOPBP1-209ENST00000513818 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 CTAG1AP78358 180 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 JOSD1Q15040 202 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 PYY3Q5JQD4 70 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 SCGB1D4Q6XE38 83 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 MRPL55Q7Z7F7 128 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 NKAPP1Q8N9T2 125 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 PAM16Q9Y3D7 125 aa6.07□□□□□ -1.44
TOPBP1-209ENST00000513818 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
TOPBP1-209ENST00000513818 LINC00587B1AMM8 73 aa6.06□□□□□ -1.44
TOPBP1-209ENST00000513818 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
TOPBP1-209ENST00000513818 IGKV2-28A0A075B6P5 120 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 IGKV2D-28P01615 120 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
TOPBP1-209ENST00000513818 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-209ENST00000513818 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
TOPBP1-209ENST00000513818 TIMM17BO60830 172 aa6.03□□□□□ -1.44
TOPBP1-209ENST00000513818 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
TOPBP1-209ENST00000513818 LINC00308Q8TCZ7 52 aa6.03□□□□□ -1.44
TOPBP1-209ENST00000513818 C14orf144Q96I85 54 aa6.03□□□□□ -1.44
TOPBP1-209ENST00000513818 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
TOPBP1-209ENST00000513818 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
TOPBP1-209ENST00000513818 COX8AP10176 69 aa6.01□□□□□ -1.45
TOPBP1-209ENST00000513818 Q75L30 129 aa6.01□□□□□ -1.45
TOPBP1-209ENST00000513818 SPANXDQ9BXN6 97 aa6.01□□□□□ -1.45
TOPBP1-209ENST00000513818 SPANXCQ9NY87 97 aa6.01□□□□□ -1.45
TOPBP1-209ENST00000513818 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms