RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 PLNP26678 52 aa10.09□□□□□ -0.79
SIM1-204ENST00000511871 Q6ZRP5 223 aa10.09□□□□□ -0.79
SIM1-204ENST00000511871 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
SIM1-204ENST00000511871 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
SIM1-204ENST00000511871 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 NMUP48645 174 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
SIM1-204ENST00000511871 PCP2Q8IVA1 136 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 CXCL5P42830 114 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
SIM1-204ENST00000511871 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
SIM1-204ENST00000511871 C9orf118A6NHY6 69 aa10.06□□□□□ -0.8
SIM1-204ENST00000511871 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
SIM1-204ENST00000511871 F8VRH5 84 aa10.06□□□□□ -0.8
SIM1-204ENST00000511871 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
SIM1-204ENST00000511871 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
SIM1-204ENST00000511871 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
SIM1-204ENST00000511871 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
SIM1-204ENST00000511871 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
SIM1-204ENST00000511871 TAL2Q16559 108 aa10.04□□□□□ -0.8
SIM1-204ENST00000511871 CBY1Q9Y3M2 126 aa10.03□□□□□ -0.8
SIM1-204ENST00000511871 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
SIM1-204ENST00000511871 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
SIM1-204ENST00000511871 C9orf129Q5T035 196 aaKnown RBP10.01□□□□□ -0.81
SIM1-204ENST00000511871 GTF2H5Q6ZYL4 71 aa10.01□□□□□ -0.81
SIM1-204ENST00000511871 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
SIM1-204ENST00000511871 SMIM13P0DJ93 91 aa10□□□□□ -0.81
SIM1-204ENST00000511871 PRR3P79522 188 aaKnown RBP10□□□□□ -0.81
SIM1-204ENST00000511871 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
SIM1-204ENST00000511871 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
SIM1-204ENST00000511871 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
SIM1-204ENST00000511871 TMEM223A0PJW6 202 aa9.98□□□□□ -0.81
SIM1-204ENST00000511871 FAM19A5Q7Z5A7 132 aaPredicted RBP9.98□□□□□ -0.81
SIM1-204ENST00000511871 CEND1Q8N111 149 aa9.98□□□□□ -0.81
SIM1-204ENST00000511871 K7EP34 96 aa9.97□□□□□ -0.81
SIM1-204ENST00000511871 E9PLD3 99 aa9.96□□□□□ -0.81
SIM1-204ENST00000511871 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.81
SIM1-204ENST00000511871 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
SIM1-204ENST00000511871 H3BUT2 72 aa9.96□□□□□ -0.82
SIM1-204ENST00000511871 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
SIM1-204ENST00000511871 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
SIM1-204ENST00000511871 FXYD2P54710 66 aa9.95□□□□□ -0.82
SIM1-204ENST00000511871 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
SIM1-204ENST00000511871 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
SIM1-204ENST00000511871 M0QXV9 152 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 SERTAD4-AS1Q5TG53 156 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 PSORS1C2Q9UIG4 136 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 FABP2P12104 132 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 OCIAD2Q56VL3 154 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
SIM1-204ENST00000511871 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
SIM1-204ENST00000511871 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
SIM1-204ENST00000511871 A0A1B0GWB2 263 aa9.91□□□□□ -0.82
SIM1-204ENST00000511871 PFN2P35080 140 aa9.91□□□□□ -0.82
SIM1-204ENST00000511871 HERVK_113P61574 105 aa9.91□□□□□ -0.82
SIM1-204ENST00000511871 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
SIM1-204ENST00000511871 SPCS1Q9Y6A9 102 aa9.91□□□□□ -0.82
SIM1-204ENST00000511871 OXTP01178 125 aa9.9□□□□□ -0.82
SIM1-204ENST00000511871 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
SIM1-204ENST00000511871 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
SIM1-204ENST00000511871 LRP1Q07954 4544 aaKnown RBP9.9□□□□□ -0.82
SIM1-204ENST00000511871 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.83
SIM1-204ENST00000511871 K7ERU9 68 aa9.89□□□□□ -0.83
SIM1-204ENST00000511871 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
SIM1-204ENST00000511871 COX17Q14061 63 aa9.89□□□□□ -0.83
SIM1-204ENST00000511871 HIST1H4GQ99525 98 aa9.89□□□□□ -0.83
SIM1-204ENST00000511871 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
SIM1-204ENST00000511871 J3QL48 77 aa9.88□□□□□ -0.83
SIM1-204ENST00000511871 C1orf137Q5JT78 98 aa9.88□□□□□ -0.83
SIM1-204ENST00000511871 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
SIM1-204ENST00000511871 UBE2BP63146 152 aa9.87□□□□□ -0.83
SIM1-204ENST00000511871 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
SIM1-204ENST00000511871 LEPROTO15243 131 aa9.86□□□□□ -0.83
SIM1-204ENST00000511871 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
SIM1-204ENST00000511871 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 TMEM238LA0A1B0GVL6 79 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 A6NJY4 79 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 NAA38Q9BRA0 125 aaKnown RBP9.85□□□□□ -0.83
SIM1-204ENST00000511871 K7ERJ3 54 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 MRPL55Q7Z7F7 128 aaKnown RBP9.85□□□□□ -0.83
SIM1-204ENST00000511871 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
SIM1-204ENST00000511871 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
SIM1-204ENST00000511871 HERV-K104P63124 156 aa9.84□□□□□ -0.83
SIM1-204ENST00000511871 SPANXB1Q9NS25 103 aaPredicted RBP9.84□□□□□ -0.83
SIM1-204ENST00000511871 LINC00158P58513 81 aa9.83□□□□□ -0.84
SIM1-204ENST00000511871 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
SIM1-204ENST00000511871 SCGB1D4Q6XE38 83 aa9.82□□□□□ -0.84
SIM1-204ENST00000511871 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
SIM1-204ENST00000511871 J3QQQ9 107 aa9.82□□□□□ -0.84
SIM1-204ENST00000511871 NKAPP1Q8N9T2 125 aa9.82□□□□□ -0.84
SIM1-204ENST00000511871 F8W1H4 67 aa9.81□□□□□ -0.84
SIM1-204ENST00000511871 VPREB1P12018 145 aa9.81□□□□□ -0.84
SIM1-204ENST00000511871 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
SIM1-204ENST00000511871 MT1HL1P0DM35 61 aa9.79□□□□□ -0.84
SIM1-204ENST00000511871 RPL24P83731 157 aaKnown RBP9.79□□□□□ -0.84
SIM1-204ENST00000511871 Q8NDZ9 215 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms