RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 CHTOPQ9Y3Y2 248 aaKnown RBP4.77□□□□□ -1.65
SMAD1-210ENST00000511255 MYCBP2O75592 4640 aa4.76□□□□□ -1.65
SMAD1-210ENST00000511255 IGLV5-39A0A0G2JS06 123 aa4.76□□□□□ -1.65
SMAD1-210ENST00000511255 COLCA2A8K830 154 aa4.76□□□□□ -1.65
SMAD1-210ENST00000511255 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
SMAD1-210ENST00000511255 C9orf129Q5T035 196 aaKnown RBP4.76□□□□□ -1.65
SMAD1-210ENST00000511255 TRAV12-1A0A0B4J245 112 aa4.75□□□□□ -1.65
SMAD1-210ENST00000511255 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
SMAD1-210ENST00000511255 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
SMAD1-210ENST00000511255 FABP4P15090 132 aa4.74□□□□□ -1.65
SMAD1-210ENST00000511255 PFN2P35080 140 aa4.74□□□□□ -1.65
SMAD1-210ENST00000511255 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
SMAD1-210ENST00000511255 SERTAD4-AS1Q5TG53 156 aa4.73□□□□□ -1.65
SMAD1-210ENST00000511255 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
SMAD1-210ENST00000511255 SPINK6Q6UWN8 80 aa4.73□□□□□ -1.65
SMAD1-210ENST00000511255 KRTAP7-1Q8IUC3 87 aa4.73□□□□□ -1.65
SMAD1-210ENST00000511255 HSPB8Q9UJY1 196 aa4.73□□□□□ -1.65
SMAD1-210ENST00000511255 TMEM223A0PJW6 202 aa4.72□□□□□ -1.65
SMAD1-210ENST00000511255 NUPR1O60356 82 aa4.72□□□□□ -1.65
SMAD1-210ENST00000511255 LBHQ53QV2 105 aaPredicted RBP4.72□□□□□ -1.65
SMAD1-210ENST00000511255 NKAPP1Q8N9T2 125 aa4.72□□□□□ -1.65
SMAD1-210ENST00000511255 ERG28Q9UKR5 140 aa4.72□□□□□ -1.65
SMAD1-210ENST00000511255 C22orf24Q9Y442 160 aa4.72□□□□□ -1.65
SMAD1-210ENST00000511255 A0A0U1RRA0 63 aa4.71□□□□□ -1.66
SMAD1-210ENST00000511255 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
SMAD1-210ENST00000511255 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
SMAD1-210ENST00000511255 SFTA2Q6UW10 78 aa4.71□□□□□ -1.66
SMAD1-210ENST00000511255 MRPL55Q7Z7F7 128 aaKnown RBP4.71□□□□□ -1.66
SMAD1-210ENST00000511255 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
SMAD1-210ENST00000511255 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BKO60814 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 ATP6V1G1O75348 118 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BJP06899 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BOP23527 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BBP33778 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 LINC00158P58513 81 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BDP58876 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BCP62807 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST2H2BEQ16778 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BHQ93079 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BNQ99877 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 HIST1H2BMQ99879 126 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 PMCHL2Q9BQD1 86 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 MAP1LC3CQ9BXW4 147 aa4.7□□□□□ -1.66
SMAD1-210ENST00000511255 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
SMAD1-210ENST00000511255 RPL37AP8A6NKH3 93 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 DPM2O94777 84 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 PLNP26678 52 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 HERVK_113P61574 105 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 COX17Q14061 63 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 DIRC1Q969H9 104 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 LINC00167Q96N53 147 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 TP73-AS1Q9UF72 201 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
SMAD1-210ENST00000511255 IGKCP01834 107 aa4.68□□□□□ -1.66
SMAD1-210ENST00000511255 LINC01600Q96MT4 127 aa4.68□□□□□ -1.66
SMAD1-210ENST00000511255 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 MYMXA0A1B0GTQ4 84 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 LEPROTO15243 131 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 SMIM13P0DJ93 91 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
SMAD1-210ENST00000511255 PCP4P48539 62 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 HERV-K104P63124 156 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 RPL24P83731 157 aaKnown RBP4.67□□□□□ -1.66
SMAD1-210ENST00000511255 PLEKHB2Q96CS7 222 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 HERC1Q15751 4861 aa4.67□□□□□ -1.66
SMAD1-210ENST00000511255 IGLV5-37A0A075B6J1 123 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 H0Y9J4 135 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 SYS1-DBNDD2H3BUS1 97 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 VPREB1P12018 145 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 PKHD1L1Q86WI1 4243 aa4.66□□□□□ -1.66
SMAD1-210ENST00000511255 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 J3QQQ9 107 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 ZNF861PO60384 105 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 BCE1O60756 84 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 S100A1P23297 94 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 RPL28P46779 137 aaKnown RBP4.65□□□□□ -1.67
SMAD1-210ENST00000511255 UBE2AP49459 152 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 MIR7-3HGQ8N6C7 128 aa4.65□□□□□ -1.67
SMAD1-210ENST00000511255 NMUP48645 174 aa4.64□□□□□ -1.67
SMAD1-210ENST00000511255 BOD1L2Q8IYS8 172 aa4.64□□□□□ -1.67
SMAD1-210ENST00000511255 IGLV1-50A0A075B6I6 118 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 NCR3O14931 201 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 KRTDAPP60985 99 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 PET117Q6UWS5 81 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 FAM19A1Q7Z5A9 133 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 PRR26Q8N8Z3 221 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 DAND5Q8N907 189 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 Q8NDZ9 215 aa4.63□□□□□ -1.67
SMAD1-210ENST00000511255 C20orf202A1L168 122 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms