RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 COX17Q14061 63 aa6.53□□□□□ -1.36
NR1I3-227ENST00000510951 PHF5AQ7RTV0 110 aaKnown RBP6.53□□□□□ -1.36
NR1I3-227ENST00000510951 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
NR1I3-227ENST00000510951 SND1-IT1Q9HBX3 110 aa6.53□□□□□ -1.36
NR1I3-227ENST00000510951 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
NR1I3-227ENST00000510951 RPL37AP61513 92 aaKnown RBP6.52□□□□□ -1.37
NR1I3-227ENST00000510951 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
NR1I3-227ENST00000510951 DAND5Q8N907 189 aa6.52□□□□□ -1.37
NR1I3-227ENST00000510951 C7orf33Q8WU49 177 aa6.52□□□□□ -1.37
NR1I3-227ENST00000510951 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
NR1I3-227ENST00000510951 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
NR1I3-227ENST00000510951 HSBP1L1C9JCN9 74 aa6.51□□□□□ -1.37
NR1I3-227ENST00000510951 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
NR1I3-227ENST00000510951 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
NR1I3-227ENST00000510951 LINC00587B1AMM8 73 aa6.49□□□□□ -1.37
NR1I3-227ENST00000510951 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
NR1I3-227ENST00000510951 UBE2BP63146 152 aa6.49□□□□□ -1.37
NR1I3-227ENST00000510951 NKAPP1Q8N9T2 125 aa6.49□□□□□ -1.37
NR1I3-227ENST00000510951 Q8NDZ9 215 aa6.49□□□□□ -1.37
NR1I3-227ENST00000510951 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
NR1I3-227ENST00000510951 NPC2P61916 151 aa6.48□□□□□ -1.37
NR1I3-227ENST00000510951 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
NR1I3-227ENST00000510951 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
NR1I3-227ENST00000510951 FAT1Q14517 4588 aa6.48□□□□□ -1.37
NR1I3-227ENST00000510951 VPREB1P12018 145 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 PRR3P79522 188 aaKnown RBP6.47□□□□□ -1.37
NR1I3-227ENST00000510951 JOSD1Q15040 202 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-227ENST00000510951 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
NR1I3-227ENST00000510951 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 TP73-AS1Q9UF72 201 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
NR1I3-227ENST00000510951 IGLV5-37A0A075B6J1 123 aa6.46□□□□□ -1.38
NR1I3-227ENST00000510951 NCR3O14931 201 aa6.46□□□□□ -1.38
NR1I3-227ENST00000510951 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
NR1I3-227ENST00000510951 LITAFQ99732 161 aa6.46□□□□□ -1.38
NR1I3-227ENST00000510951 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
NR1I3-227ENST00000510951 PAM16Q9Y3D7 125 aa6.46□□□□□ -1.38
NR1I3-227ENST00000510951 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 TIMM17BO60830 172 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 RPL24P83731 157 aaKnown RBP6.45□□□□□ -1.38
NR1I3-227ENST00000510951 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
NR1I3-227ENST00000510951 PYY3Q5JQD4 70 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 SOSTDC1Q6X4U4 206 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 LINC00167Q96N53 147 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
NR1I3-227ENST00000510951 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
NR1I3-227ENST00000510951 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
NR1I3-227ENST00000510951 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
NR1I3-227ENST00000510951 C1orf137Q5JT78 98 aa6.44□□□□□ -1.38
NR1I3-227ENST00000510951 IGKV2-28A0A075B6P5 120 aa6.43□□□□□ -1.38
NR1I3-227ENST00000510951 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
NR1I3-227ENST00000510951 IGKV2D-28P01615 120 aa6.43□□□□□ -1.38
NR1I3-227ENST00000510951 VPS13BQ7Z7G8 4022 aa6.43□□□□□ -1.38
NR1I3-227ENST00000510951 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
NR1I3-227ENST00000510951 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
NR1I3-227ENST00000510951 LINC00308Q8TCZ7 52 aa6.42□□□□□ -1.38
NR1I3-227ENST00000510951 M0R378 163 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 COX8AP10176 69 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
NR1I3-227ENST00000510951 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
NR1I3-227ENST00000510951 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
NR1I3-227ENST00000510951 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
NR1I3-227ENST00000510951 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
NR1I3-227ENST00000510951 GHRHP01286 108 aa6.39□□□□□ -1.39
NR1I3-227ENST00000510951 SPANXB1Q9NS25 103 aaPredicted RBP6.39□□□□□ -1.39
NR1I3-227ENST00000510951 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
NR1I3-227ENST00000510951 NDUFC2O95298 119 aa6.38□□□□□ -1.39
NR1I3-227ENST00000510951 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
NR1I3-227ENST00000510951 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
NR1I3-227ENST00000510951 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
NR1I3-227ENST00000510951 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
NR1I3-227ENST00000510951 REG3GQ6UW15 175 aa6.37□□□□□ -1.39
NR1I3-227ENST00000510951 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
NR1I3-227ENST00000510951 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 DLEU1O43261 78 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 BCE1O60756 84 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 IFITM1P13164 125 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 DDTP30046 118 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 Q6ZVH6 145 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
NR1I3-227ENST00000510951 PRYO14603 147 aa6.35□□□□□ -1.39
NR1I3-227ENST00000510951 UBE2AP49459 152 aa6.35□□□□□ -1.39
NR1I3-227ENST00000510951 S100A12P80511 92 aa6.35□□□□□ -1.39
NR1I3-227ENST00000510951 PRLHP81277 87 aa6.35□□□□□ -1.39
NR1I3-227ENST00000510951 FAM19A1Q7Z5A9 133 aa6.35□□□□□ -1.39
NR1I3-227ENST00000510951 SPINK6Q6UWN8 80 aa6.34□□□□□ -1.39
NR1I3-227ENST00000510951 C2orf91Q6ZV80 131 aa6.34□□□□□ -1.39
NR1I3-227ENST00000510951 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
NR1I3-227ENST00000510951 OR13C6PQ8NH95 151 aa6.34□□□□□ -1.39
NR1I3-227ENST00000510951 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
NR1I3-227ENST00000510951 TRAV23DV6A0A075B6W5 121 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms