RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	TEX43	Q6ZNM6	134 aa		4.78	□□□□□ -1.64
PTPN20-223	ENST00000509900	FAM19A3	Q7Z5A8	133 aa		4.78	□□□□□ -1.64
PTPN20-223	ENST00000509900	C20orf78	Q9BR46	151 aa		4.78	□□□□□ -1.64
PTPN20-223	ENST00000509900		A8MWL6	223 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	GIP	P09681	153 aa	Predicted RBP	4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	KIAA1644	Q3SXP7	199 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	OCC1	Q8TAD7	63 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	LIMD2	Q9BT23	127 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	SMIM2	Q9BVW6	85 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	MANBAL	Q9NQG1	85 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	GNG13	Q9P2W3	67 aa		4.77	□□□□□ -1.65
PTPN20-223	ENST00000509900	TRBV24-1	A0A075B6N3	115 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	ERC2-IT1	O76042	136 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	MRPL51	Q4U2R6	128 aa	Known RBP	4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	C9orf153	Q5TBE3	101 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	BORCS7	Q96B45	105 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	C2orf88	Q9BSF0	95 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	SND1-IT1	Q9HBX3	110 aa		4.76	□□□□□ -1.65
PTPN20-223	ENST00000509900	GATC	O43716	136 aa	Known RBP	4.75	□□□□□ -1.65
PTPN20-223	ENST00000509900	RAB14	P61106	215 aa		4.75	□□□□□ -1.65
PTPN20-223	ENST00000509900	RPL24	P83731	157 aa	Known RBP	4.75	□□□□□ -1.65
PTPN20-223	ENST00000509900	AMELX	Q99217	191 aa		4.75	□□□□□ -1.65
PTPN20-223	ENST00000509900	GPR98	Q8WXG9	6306 aa		4.75	□□□□□ -1.65
PTPN20-223	ENST00000509900	HIGD1C	A8MV81	97 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	SMIM1	B2RUZ4	78 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	SPRR1A	P35321	89 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	HRCT1	Q6UXD1	115 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	C2orf66	Q6UXQ4	117 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	COX7B2	Q8TF08	81 aa		4.74	□□□□□ -1.65
PTPN20-223	ENST00000509900	FXYD6-FXYD2	A0A087WZ82	144 aa		4.73	□□□□□ -1.65
PTPN20-223	ENST00000509900	PDE6D	O43924	150 aa		4.73	□□□□□ -1.65
PTPN20-223	ENST00000509900	PFN2	P35080	140 aa		4.73	□□□□□ -1.65
PTPN20-223	ENST00000509900	HERVK_113	P63121	156 aa		4.73	□□□□□ -1.65
PTPN20-223	ENST00000509900	C20orf166-AS1	Q96NR2	134 aa		4.73	□□□□□ -1.65
PTPN20-223	ENST00000509900	UMAD1	C9J7I0	102 aa		4.72	□□□□□ -1.65
PTPN20-223	ENST00000509900	PRY	O14603	147 aa		4.72	□□□□□ -1.65
PTPN20-223	ENST00000509900	FAM104B	Q5XKR9	115 aa		4.72	□□□□□ -1.65
PTPN20-223	ENST00000509900	LINC00862	A6NCI5	91 aa		4.71	□□□□□ -1.66
PTPN20-223	ENST00000509900	PDZD11	Q5EBL8	140 aa		4.71	□□□□□ -1.66
PTPN20-223	ENST00000509900	KRTAP2-1	Q9BYU5	128 aa		4.71	□□□□□ -1.66
PTPN20-223	ENST00000509900	VCX2	Q9H322	139 aa		4.71	□□□□□ -1.66
PTPN20-223	ENST00000509900	ETDC	A0A1B0GVM5	59 aa		4.7	□□□□□ -1.66
PTPN20-223	ENST00000509900	PRSS47	A8MTI9	375 aa		4.7	□□□□□ -1.66
PTPN20-223	ENST00000509900	NPY	P01303	97 aa		4.7	□□□□□ -1.66
PTPN20-223	ENST00000509900	CKS2	P33552	79 aa		4.7	□□□□□ -1.66
PTPN20-223	ENST00000509900	IFITM3	Q01628	133 aa		4.7	□□□□□ -1.66
PTPN20-223	ENST00000509900	MT3	P25713	68 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900	SEC11A	P67812	179 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900	RIG	Q13278	110 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900	C1orf195	Q5TG92	126 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900	S100Z	Q8WXG8	99 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900		Q9BRP9	147 aa		4.69	□□□□□ -1.66
PTPN20-223	ENST00000509900	ATP5L	O75964	103 aa		4.68	□□□□□ -1.66
PTPN20-223	ENST00000509900	RAB5A	P20339	215 aa		4.68	□□□□□ -1.66
PTPN20-223	ENST00000509900	ATP11AUN	Q6ZP68	121 aa		4.68	□□□□□ -1.66
PTPN20-223	ENST00000509900	MPLKIP	Q8TAP9	179 aa		4.68	□□□□□ -1.66
PTPN20-223	ENST00000509900	KCNQ1DN	Q9H478	68 aa		4.68	□□□□□ -1.66
PTPN20-223	ENST00000509900		D6R8Y8	96 aa		4.67	□□□□□ -1.66
PTPN20-223	ENST00000509900	LINC00299	Q6ZSB3	139 aa		4.67	□□□□□ -1.66
PTPN20-223	ENST00000509900	TRBV20-1	A0A075B6N2	111 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	IGLV5-39	A0A0G2JS06	123 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	LOC389332	A0A1B0GUA5	103 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	IGIP	A6NJ69	53 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	ARPC5	O15511	151 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	SPINK8	P0C7L1	97 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	ERG28	Q9UKR5	140 aa		4.66	□□□□□ -1.66
PTPN20-223	ENST00000509900	CYSLTR1	Q9Y271	337 aa		4.65	□□□□□ -1.67
PTPN20-223	ENST00000509900	IGLV5-45	A0A087WSX0	123 aa		4.64	□□□□□ -1.67
PTPN20-223	ENST00000509900		H7C2G1	150 aa		4.64	□□□□□ -1.67
PTPN20-223	ENST00000509900		Q75L30	129 aa		4.64	□□□□□ -1.67
PTPN20-223	ENST00000509900	TRAV9-1	A0A075B6T8	112 aa		4.63	□□□□□ -1.67
PTPN20-223	ENST00000509900	COX17	Q14061	63 aa		4.63	□□□□□ -1.67
PTPN20-223	ENST00000509900		Q5XG85	94 aa		4.63	□□□□□ -1.67
PTPN20-223	ENST00000509900	SMIM29	Q86T20	159 aa		4.62	□□□□□ -1.67
PTPN20-223	ENST00000509900	TRBV10-3	A0A0K0K1G6	114 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	FAM236D	A0A1B0GTK5	79 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	TINCR	A0A1B0GVN0	87 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	NCR3	O14931	201 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	FAM236C	P0DP71	79 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	CD164	Q04900	197 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	C6orf99	Q4VX62	202 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900		Q6ZRX8	168 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	ST20-AS1	Q8NBB2	130 aa		4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900	ZNF625	Q96I27	306 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN20-223	ENST00000509900		A6NN06	94 aa		4.6	□□□□□ -1.67
PTPN20-223	ENST00000509900		Q1RN00	199 aa		4.6	□□□□□ -1.67
PTPN20-223	ENST00000509900	RGS21	Q2M5E4	152 aa		4.6	□□□□□ -1.67
PTPN20-223	ENST00000509900	OSTC	Q9NRP0	149 aa		4.6	□□□□□ -1.67
PTPN20-223	ENST00000509900		V9GYV3	84 aa		4.6	□□□□□ -1.67
PTPN20-223	ENST00000509900	PPBP	P02775	128 aa		4.59	□□□□□ -1.67
PTPN20-223	ENST00000509900	C10orf91	Q5T1B1	145 aa		4.59	□□□□□ -1.67
PTPN20-223	ENST00000509900	TEX46	H3BTG2	121 aa		4.58	□□□□□ -1.68
PTPN20-223	ENST00000509900	PAPPA-AS1	Q5QFB9	102 aa		4.58	□□□□□ -1.68
PTPN20-223	ENST00000509900	ALKAL2	Q6UX46	152 aa		4.58	□□□□□ -1.68
PTPN20-223	ENST00000509900	NAT8B	Q9UHF3	227 aa		4.58	□□□□□ -1.68
PTPN20-223	ENST00000509900	HMSD	A8MTL9	139 aa		4.57	□□□□□ -1.68
PTPN20-223	ENST00000509900	SPRR2E	P22531	72 aa		4.57	□□□□□ -1.68
PTPN20-223	ENST00000509900	SPRR2B	P35325	72 aa		4.57	□□□□□ -1.68
PTPN20-223	ENST00000509900	SPRR2A	P35326	72 aa		4.57	□□□□□ -1.68
PTPN20-223	ENST00000509900	TAGLN2	P37802	199 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms