RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
SKP2-205ENST00000509692 PLA2G1BP04054 148 aaKnown RBP10.33□□□□□ -0.76
SKP2-205ENST00000509692 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
SKP2-205ENST00000509692 FAM168BA1KXE4 195 aa10.32□□□□□ -0.76
SKP2-205ENST00000509692 KRTAP10-4P60372 401 aaPredicted RBP10.32□□□□□ -0.76
SKP2-205ENST00000509692 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
SKP2-205ENST00000509692 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
SKP2-205ENST00000509692 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
SKP2-205ENST00000509692 FAT3Q8TDW7 4589 aa10.3□□□□□ -0.76
SKP2-205ENST00000509692 FAM19A5Q7Z5A7 132 aaPredicted RBP10.29□□□□□ -0.76
SKP2-205ENST00000509692 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SKP2-205ENST00000509692 PYY3Q5JQD4 70 aa10.29□□□□□ -0.76
SKP2-205ENST00000509692 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
SKP2-205ENST00000509692 KRTAP7-1Q8IUC3 87 aa10.27□□□□□ -0.77
SKP2-205ENST00000509692 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
SKP2-205ENST00000509692 DAND5Q8N907 189 aa10.26□□□□□ -0.77
SKP2-205ENST00000509692 VAMP8Q9BV40 100 aa10.26□□□□□ -0.77
SKP2-205ENST00000509692 SCGB1D4Q6XE38 83 aa10.25□□□□□ -0.77
SKP2-205ENST00000509692 PLA2G2DQ9UNK4 145 aa10.25□□□□□ -0.77
SKP2-205ENST00000509692 PAM16Q9Y3D7 125 aa10.25□□□□□ -0.77
SKP2-205ENST00000509692 TIMM17BO60830 172 aa10.25□□□□□ -0.77
SKP2-205ENST00000509692 M0QXV9 152 aa10.24□□□□□ -0.77
SKP2-205ENST00000509692 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
SKP2-205ENST00000509692 SPATA45Q537H7 98 aa10.24□□□□□ -0.77
SKP2-205ENST00000509692 ADAMTSL4-AS1Q5T5F5 129 aa10.24□□□□□ -0.77
SKP2-205ENST00000509692 PHF5AQ7RTV0 110 aaKnown RBP10.24□□□□□ -0.77
SKP2-205ENST00000509692 LITAFQ99732 161 aa10.24□□□□□ -0.77
SKP2-205ENST00000509692 DMBT1Q9UGM3 2413 aaPredicted RBP10.24□□□□□ -0.77
SKP2-205ENST00000509692 C7orf33Q8WU49 177 aa10.23□□□□□ -0.77
SKP2-205ENST00000509692 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
SKP2-205ENST00000509692 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
SKP2-205ENST00000509692 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 TMEM238C9JI98 176 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 COX8AP10176 69 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 VPREB1P12018 145 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 BOD1L2Q8IYS8 172 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 NKAPP1Q8N9T2 125 aa10.21□□□□□ -0.78
SKP2-205ENST00000509692 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 NPC2P61916 151 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 Q8NDZ9 215 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 MIEN1Q9BRT3 115 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 TP73-AS1Q9UF72 201 aa10.2□□□□□ -0.78
SKP2-205ENST00000509692 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
SKP2-205ENST00000509692 LBHQ53QV2 105 aaPredicted RBP10.18□□□□□ -0.78
SKP2-205ENST00000509692 MRPL55Q7Z7F7 128 aaKnown RBP10.18□□□□□ -0.78
SKP2-205ENST00000509692 C14orf144Q96I85 54 aa10.18□□□□□ -0.78
SKP2-205ENST00000509692 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
SKP2-205ENST00000509692 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
SKP2-205ENST00000509692 SPANXCQ9NY87 97 aa10.18□□□□□ -0.78
SKP2-205ENST00000509692 LOC105371267A0A1B0GV96 52 aa10.17□□□□□ -0.78
SKP2-205ENST00000509692 DLEU1O43261 78 aa10.17□□□□□ -0.78
SKP2-205ENST00000509692 EIF4EBP3O60516 100 aaPredicted RBP10.17□□□□□ -0.78
SKP2-205ENST00000509692 UBE2BP63146 152 aa10.17□□□□□ -0.78
SKP2-205ENST00000509692 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
SKP2-205ENST00000509692 LINC00167Q96N53 147 aa10.16□□□□□ -0.78
SKP2-205ENST00000509692 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
SKP2-205ENST00000509692 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.79
SKP2-205ENST00000509692 S100A12P80511 92 aa10.15□□□□□ -0.79
SKP2-205ENST00000509692 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.79
SKP2-205ENST00000509692 Q6ZVH6 145 aa10.15□□□□□ -0.79
SKP2-205ENST00000509692 KRTAP11-1Q8IUC1 163 aa10.15□□□□□ -0.79
SKP2-205ENST00000509692 NCR3O14931 201 aa10.14□□□□□ -0.79
SKP2-205ENST00000509692 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 M0R378 163 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 NDUFC2O95298 119 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 IFITM1P13164 125 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 SPANXB1Q9NS25 103 aaPredicted RBP10.13□□□□□ -0.79
SKP2-205ENST00000509692 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
SKP2-205ENST00000509692 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
SKP2-205ENST00000509692 SRSF9Q13242 221 aaKnown RBP eCLIP10.12□□□□□ -0.79
SKP2-205ENST00000509692 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
SKP2-205ENST00000509692 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
SKP2-205ENST00000509692 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
SKP2-205ENST00000509692 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
SKP2-205ENST00000509692 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
SKP2-205ENST00000509692 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
SKP2-205ENST00000509692 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
SKP2-205ENST00000509692 J3QL48 77 aa10.09□□□□□ -0.79
SKP2-205ENST00000509692 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
SKP2-205ENST00000509692 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
SKP2-205ENST00000509692 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
SKP2-205ENST00000509692 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
SKP2-205ENST00000509692 TNXBP22105 4242 aa10.07□□□□□ -0.8
SKP2-205ENST00000509692 OXTP01178 125 aa10.06□□□□□ -0.8
SKP2-205ENST00000509692 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
SKP2-205ENST00000509692 DDTP30046 118 aa10.05□□□□□ -0.8
SKP2-205ENST00000509692 S100A7L2Q5SY68 101 aa10.05□□□□□ -0.8
SKP2-205ENST00000509692 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
SKP2-205ENST00000509692 UQCR10Q9UDW1 63 aa10.04□□□□□ -0.8
SKP2-205ENST00000509692 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
SKP2-205ENST00000509692 BCE1O60756 84 aa10.03□□□□□ -0.8
SKP2-205ENST00000509692 IGLV6-57P01721 117 aa10.03□□□□□ -0.8
SKP2-205ENST00000509692 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
SKP2-205ENST00000509692 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
SKP2-205ENST00000509692 KCNQ1DNQ9H478 68 aa10.03□□□□□ -0.8
SKP2-205ENST00000509692 PRYO14603 147 aa10.02□□□□□ -0.81
SKP2-205ENST00000509692 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
SKP2-205ENST00000509692 PRO1933Q9H354 126 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms