RNA–Protein interactions for RNA: ENST00000509553.1

SH3TC1-218, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-218ENST00000509553 COX8AP10176 69 aa9.71□□□□□ -0.86
SH3TC1-218ENST00000509553 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
SH3TC1-218ENST00000509553 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
SH3TC1-218ENST00000509553 NPC2P61916 151 aa9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 Q8NDZ9 215 aa9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
SH3TC1-218ENST00000509553 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
SH3TC1-218ENST00000509553 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
SH3TC1-218ENST00000509553 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
SH3TC1-218ENST00000509553 TIMM17BO60830 172 aa9.68□□□□□ -0.86
SH3TC1-218ENST00000509553 CDK2AP2O75956 126 aa9.68□□□□□ -0.86
SH3TC1-218ENST00000509553 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
SH3TC1-218ENST00000509553 SMIM6P0DI80 62 aa9.67□□□□□ -0.86
SH3TC1-218ENST00000509553 EPM2AB3EWF7 344 aa9.66□□□□□ -0.86
SH3TC1-218ENST00000509553 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
SH3TC1-218ENST00000509553 VPS13BQ7Z7G8 4022 aa9.66□□□□□ -0.86
SH3TC1-218ENST00000509553 DLEU1O43261 78 aa9.65□□□□□ -0.86
SH3TC1-218ENST00000509553 S100A12P80511 92 aa9.65□□□□□ -0.86
SH3TC1-218ENST00000509553 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
SH3TC1-218ENST00000509553 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
SH3TC1-218ENST00000509553 VPREB1P12018 145 aa9.64□□□□□ -0.87
SH3TC1-218ENST00000509553 SLC25A34Q6PIV7 304 aa9.64□□□□□ -0.87
SH3TC1-218ENST00000509553 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
SH3TC1-218ENST00000509553 M0QXV9 152 aa9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
SH3TC1-218ENST00000509553 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
SH3TC1-218ENST00000509553 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
SH3TC1-218ENST00000509553 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
SH3TC1-218ENST00000509553 PRO1933Q9H354 126 aa9.62□□□□□ -0.87
SH3TC1-218ENST00000509553 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
SH3TC1-218ENST00000509553 MIEN1Q9BRT3 115 aa9.61□□□□□ -0.87
SH3TC1-218ENST00000509553 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
SH3TC1-218ENST00000509553 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
SH3TC1-218ENST00000509553 NCR3O14931 201 aa9.6□□□□□ -0.87
SH3TC1-218ENST00000509553 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
SH3TC1-218ENST00000509553 C12orf57Q99622 126 aa9.6□□□□□ -0.87
SH3TC1-218ENST00000509553 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
SH3TC1-218ENST00000509553 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
SH3TC1-218ENST00000509553 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
SH3TC1-218ENST00000509553 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
SH3TC1-218ENST00000509553 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
SH3TC1-218ENST00000509553 SRSF9Q13242 221 aaKnown RBP eCLIP9.58□□□□□ -0.88
SH3TC1-218ENST00000509553 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
SH3TC1-218ENST00000509553 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
SH3TC1-218ENST00000509553 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
SH3TC1-218ENST00000509553 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
SH3TC1-218ENST00000509553 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
SH3TC1-218ENST00000509553 Q6ZVH6 145 aa9.56□□□□□ -0.88
SH3TC1-218ENST00000509553 HIST1H4GQ99525 98 aa9.56□□□□□ -0.88
SH3TC1-218ENST00000509553 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
SH3TC1-218ENST00000509553 IFITM1P13164 125 aa9.55□□□□□ -0.88
SH3TC1-218ENST00000509553 UBE2BP63146 152 aa9.55□□□□□ -0.88
SH3TC1-218ENST00000509553 LINC00518Q8N0U6 118 aa9.55□□□□□ -0.88
SH3TC1-218ENST00000509553 IGKV2-28A0A075B6P5 120 aa9.54□□□□□ -0.88
SH3TC1-218ENST00000509553 M0R378 163 aa9.54□□□□□ -0.88
SH3TC1-218ENST00000509553 NDUFC2O95298 119 aa9.54□□□□□ -0.88
SH3TC1-218ENST00000509553 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
SH3TC1-218ENST00000509553 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
SH3TC1-218ENST00000509553 Q8N1X5 172 aa9.53□□□□□ -0.88
SH3TC1-218ENST00000509553 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.89
SH3TC1-218ENST00000509553 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 A4D1N5 150 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 Q5VSD8 79 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SH3TC1-218ENST00000509553 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
SH3TC1-218ENST00000509553 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
SH3TC1-218ENST00000509553 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
SH3TC1-218ENST00000509553 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
SH3TC1-218ENST00000509553 MYCBP2O75592 4640 aa9.49□□□□□ -0.89
SH3TC1-218ENST00000509553 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
SH3TC1-218ENST00000509553 DDTP30046 118 aa9.48□□□□□ -0.89
SH3TC1-218ENST00000509553 TAL2Q16559 108 aa9.48□□□□□ -0.89
SH3TC1-218ENST00000509553 C1orf137Q5JT78 98 aa9.48□□□□□ -0.89
SH3TC1-218ENST00000509553 CEND1Q8N111 149 aa9.48□□□□□ -0.89
SH3TC1-218ENST00000509553 IGLV6-57P01721 117 aa9.47□□□□□ -0.89
SH3TC1-218ENST00000509553 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
SH3TC1-218ENST00000509553 FXYD2P54710 66 aa9.46□□□□□ -0.9
SH3TC1-218ENST00000509553 HSD52Q0P140 79 aa9.46□□□□□ -0.9
SH3TC1-218ENST00000509553 OR13C6PQ8NH95 151 aa9.46□□□□□ -0.9
SH3TC1-218ENST00000509553 TSTD3H0UI37 97 aa9.45□□□□□ -0.9
SH3TC1-218ENST00000509553 HERC1Q15751 4861 aa9.44□□□□□ -0.9
SH3TC1-218ENST00000509553 A6NDN8 102 aa9.44□□□□□ -0.9
SH3TC1-218ENST00000509553 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
SH3TC1-218ENST00000509553 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
SH3TC1-218ENST00000509553 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
SH3TC1-218ENST00000509553 PRYO14603 147 aa9.43□□□□□ -0.9
SH3TC1-218ENST00000509553 CTAG1AP78358 180 aa9.43□□□□□ -0.9
SH3TC1-218ENST00000509553 KCNQ1DNQ9H478 68 aa9.43□□□□□ -0.9
SH3TC1-218ENST00000509553 CFC1BP0CG36 223 aa9.42□□□□□ -0.9
SH3TC1-218ENST00000509553 CFC1P0CG37 223 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms