RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 ABCA12Q86UK0 2595 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 ENHOQ6UWT2 76 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 WFDC9Q8NEX5 89 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 A0A096LPF7 62 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 CXCL6P80162 114 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
PDGFRA-208ENST00000509490 KRTAP26-1Q6PEX3 210 aa6.19□□□□□ -1.42
PDGFRA-208ENST00000509490 TLN2Q9Y4G6 2542 aa6.19□□□□□ -1.42
PDGFRA-208ENST00000509490 A0A087WVE0 104 aa6.19□□□□□ -1.42
PDGFRA-208ENST00000509490 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
PDGFRA-208ENST00000509490 WNK1Q9H4A3 2382 aa6.19□□□□□ -1.42
PDGFRA-208ENST00000509490 Q8N3U1 123 aa6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 DEFB135Q30KP9 77 aa6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-208ENST00000509490 IGLV10-54A0A075B6I4 117 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 EGFEM1PQ0D2K5 195 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 DIRC1Q969H9 104 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 C3orf56Q8N813 242 aa6.17□□□□□ -1.42
PDGFRA-208ENST00000509490 VPREB1P12018 145 aa6.16□□□□□ -1.42
PDGFRA-208ENST00000509490 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
PDGFRA-208ENST00000509490 C2CD3Q4AC94 2353 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 SPATA3Q8NHX4 192 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 JMJD1CQ15652 2540 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 EPM2AB3EWF7 344 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 Q6ZVQ6 151 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 DSCR8Q96T75 97 aa6.15□□□□□ -1.42
PDGFRA-208ENST00000509490 M0R378 163 aa6.15□□□□□ -1.43
PDGFRA-208ENST00000509490 COX7BP24311 80 aa6.15□□□□□ -1.43
PDGFRA-208ENST00000509490 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.43
PDGFRA-208ENST00000509490 Q6ZQY7 126 aa6.14□□□□□ -1.43
PDGFRA-208ENST00000509490 NF1P21359 2839 aa6.14□□□□□ -1.43
PDGFRA-208ENST00000509490 RETNQ9HD89 108 aa6.14□□□□□ -1.43
PDGFRA-208ENST00000509490 KLK12Q9UKR0 248 aa6.14□□□□□ -1.43
PDGFRA-208ENST00000509490 CUBNO60494 3623 aa6.14□□□□□ -1.43
PDGFRA-208ENST00000509490 J3QKU1 62 aa6.13□□□□□ -1.43
PDGFRA-208ENST00000509490 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
PDGFRA-208ENST00000509490 KLKP1Q107X0 134 aa6.13□□□□□ -1.43
PDGFRA-208ENST00000509490 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-208ENST00000509490 A0A1B0GW54 56 aa6.12□□□□□ -1.43
PDGFRA-208ENST00000509490 LAMTOR3Q9UHA4 124 aa6.12□□□□□ -1.43
PDGFRA-208ENST00000509490 ZFYVE26Q68DK2 2539 aa6.12□□□□□ -1.43
PDGFRA-208ENST00000509490 DEFB4AO15263 64 aa6.12□□□□□ -1.43
PDGFRA-208ENST00000509490 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
PDGFRA-208ENST00000509490 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
PDGFRA-208ENST00000509490 LCE2BO14633 110 aa6.11□□□□□ -1.43
PDGFRA-208ENST00000509490 FAM19A5Q7Z5A7 132 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-208ENST00000509490 M0R2N4 97 aa6.11□□□□□ -1.43
PDGFRA-208ENST00000509490 C15orf56Q8N910 161 aa6.11□□□□□ -1.43
PDGFRA-208ENST00000509490 ERC2-IT1O76042 136 aa6.1□□□□□ -1.43
PDGFRA-208ENST00000509490 V9GYY9 64 aa6.1□□□□□ -1.43
PDGFRA-208ENST00000509490 TLX1NBP0CAT3 122 aa6.09□□□□□ -1.43
PDGFRA-208ENST00000509490 LINC01556Q5JQF7 62 aa6.09□□□□□ -1.43
PDGFRA-208ENST00000509490 SMR3AQ99954 134 aa6.09□□□□□ -1.43
PDGFRA-208ENST00000509490 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.44
PDGFRA-208ENST00000509490 KCNQ1DNQ9H478 68 aa6.09□□□□□ -1.44
PDGFRA-208ENST00000509490 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
PDGFRA-208ENST00000509490 H7BZZ5 65 aa6.08□□□□□ -1.44
PDGFRA-208ENST00000509490 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
PDGFRA-208ENST00000509490 NDUFC1O43677 76 aa6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 Q6ZRU5 148 aa6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 OXTP01178 125 aa6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 WFDC10BQ8IUB3 73 aa6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
PDGFRA-208ENST00000509490 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
PDGFRA-208ENST00000509490 H3BS24 57 aa6.06□□□□□ -1.44
PDGFRA-208ENST00000509490 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 DNAH10OSP0CZ25 163 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 HTN3P15516 51 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 CCDC168Q8NDH2 2452 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
PDGFRA-208ENST00000509490 TRAV10A0A0B4J240 114 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 SPRR1AP35321 89 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 HAMPP81172 84 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 MRAPQ8TCY5 172 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 INAFM1C9JVW0 142 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 Q6ZRP5 223 aa6.04□□□□□ -1.44
PDGFRA-208ENST00000509490 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 Q5XG85 94 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 ESRGQ1W209 222 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 TNP2Q05952 138 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 SYCNQ0VAF6 134 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
PDGFRA-208ENST00000509490 DHRS4-AS1Q9P1J3 65 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms